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Diamond Nanoparticles for MALDI-TOF Mass Analysis of Bacterial Surface and Secretion Proteins

机译:用于MALDI-TOF的金刚石纳米粒子的细菌表面和分泌蛋白分析

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摘要

Acinetobacter baumannii is a gram-negative pathogen and it causes an important percentage of nosocomial infections mainly affecting immunocompromised patients. This microorganism is almost invariably multi-drug resistant (MDR). Currently, one of the popular methods of generating protein profiles is sodium dodecyl sulfate-polyacrylamide gel electrophoriese (SDS-PAGE). However, it has the disadvantages concerning automation and field applications. Our previous study showed the putative sensor kinase bfmS genes were correlated with the bacterial surface or secretion proteins of A. baumannii. In this study, we present a novel and rapid microanalytical protein-based approach, diamond nanoparticles, as a high-affinity probe to capture bacterial surface or secretion protein for the analysis of difference of proteins expression between wild type strain and bfmS knockout mutant by matrix-assisted laser desorption/ionization (MALDI) time-of-flight (TOF) mass spectrometry (MS). We found diamond nanoparticles captured more proteins with better resolution while SDS-PAGE analysis showed only fewer bands of proteins.
机译:AcineTobacter Baumannii是革兰氏阴性病原体,导致主要影响免疫功能性患者的重要百分比百分比。这种微生物几乎是无体毒性的(MDR)。目前,产生蛋白质谱的流行方法之一是十二烷基硫酸钠 - 聚丙烯酰胺凝胶电子邮件(SDS-PAGE)。但是,它具有关于自动化和现场应用的缺点。我们以前的研究表明推定的传感器激酶BFMS基因与A.Baumannii的细菌表面或分泌蛋白相关。在这项研究中,我们提出了一种新颖且快速的微胰蛋白基于蛋白质的方法,金刚石纳米粒子,作为高亲和力探针,以捕获细菌表面或分泌蛋白,以分析野生型菌株和BFMS敲除突变体之间的蛋白质表达的差异-Assisted激光解吸/电离(MALDI)飞行时间(TOF)质谱(MS)。我们发现钻石纳米粒子以更好的分辨率捕获更多蛋白质,而SDS-PAGE分析显示较少的蛋白质。

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