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An adaptive grid non-parametric approach to pharmacokinetic and dynamic (PK/PD) population models

机译:药代动力学和动态(PK / PD)人口模型的自适应网格非参数方法

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Our NPEM software for non-parametric PK/PD population modeling employs the classical EM Optimization algorithm to compute a maximum likelihood distribution on a large multidimensional grid. In order to achieve good resolution, a large number of grid points must be chosen, which can lead to high computational demands requiring a large-scale parallel supercomputer. Here we describe an improved method NPAG that uses a sequence of adaptively refitted grids, as well as a new, state-of-the-art interior point algorithm for solving the associated maximum likelihood problem on each successive grid. The combination of the adaptive grid strategy with the interior point algorithm is far foster than the original NPEM method. Also, NPAG requires much less memory, thus making many computations feasible on a PC or workstation that previously required supercomputer resources. Finally, the new algorithm easily and naturally accommodates the simultaneous maximum likelihood estimation of both intra- individual and inter-individual variability, thus improving usability and removing a major limitation of the original NPEM pro grain.
机译:我们的非参数PK / PD种群建模的NPEM软件采用经典的EM优化算法来计算大型多维网格上的最大似然分布。为了实现良好的分辨率,必须选择大量网格点,这可能导致需要大规模并行超级计算机的高计算需求。在这里,我们描述了一种改进的方法NPAG,其使用一系列自适应地改进的网格,以及一种新的最先进的内部点算法,用于解决每个连续网格上的相关最大似然问题。自适应网格策略与内部点算法的组合比原始NPEM方法远远福科。此外,NPAG需要更少的内存,从而使得在先前需要超级计算机资源的PC或工作站上可行的许多计算。最后,新算法容易且自然地容纳了个人内部和各种间可变性的同时最大似然估计,从而提高了可用性并去除原始NPEM Pro晶粒的主要限制。

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