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Interference-Free Design Methodology for Paper-Based Digital Microfluidic Biochips

机译:基于纸质数字微流体生物芯片的无干扰设计方法

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Paper-based digital microfluidic biochips (P-DMFBs) have recently attracted great attention for its low-cost, in-place, and fast fabrication. This technology is essential for agile bio-assay development and deployment. P-DMFBs print electrodes and associate control lines on paper to control droplets and complete bio-assays. However, P-DMFBs have following issues: 1) control line interference may cause unwanted droplet movements, 2) avoiding control interference degrades assay performance and routability, 3) single layer fabrication limits routability, and 4) expensive ink cost limits low-cost benefits of P-DMFBs. To solve above issues, this work proposes an interference-free design methodology to design P-DMFBs with fast assay speed, better routability, and compact printing area. The contributions are as follows: First, we categorize control interference into soft and hard. Second, we identify only soft interference happens and propose to remove soft control interference constraints. Third, we propose an interference-free design methodology. Finally, we propose a cost-efficient ILP-based fluidic design module. Experimental results show proposed method outperforms prior work [14] across all bio-assay benchmarks. Compared to previous work, our cost-optimized designs use only 47%~78% area, gain 3.6%~16.2% more routing resources, and achieve 0.97x~1.5x shorter assay completion time. Our performance-optimized designs can accelerate assay speed by 1.05x~1.65x using 81%~96% printed area.
机译:基于纸质的数字微流体生物芯片(P-DMFB)最近引起了它的低成本,就地和快速的制造。这项技术对于敏捷生物检测和部署至关重要。 P-DMFBS打印电极和纸上的关联控制线以控制液滴和完整的生物测定。但是,P-DMFB具有以下问题:1)控制线干扰可能会导致不需要的液滴移动,2)避免控制干扰降低测定性能和可排出性,3)单层制造限制可排放,并且4)昂贵的墨水成本限制了低成本的益处p-dmfbs。为了解决上述问题,这项工作提出了一种无干扰设计方法,以设计具有快速测定速度,更好的无排水性和紧凑型印刷区域的P-DMFB。贡献如下:首先,我们将控制干扰分类为柔软和硬。其次,我们只识别软干扰发生并建议去除软控制干扰约束。第三,我们提出无干扰设计方法。最后,我们提出了一种具有成本效益的基于ILP的流体设计模块。实验结果表明,在所有生物测定基准中,所提出的方法优于工作[14]。与以前的工作相比,我们的成本优化设计仅使用47%〜78%的面积,获得3.6%〜16.2%的路由资源,达到0.97x〜1.5倍的测定完成时间。我们的性能优化的设计可以使用81%〜96%的印刷区域将测定速度加速1.05x〜1.65x。

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