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Robust Blind Deconvolution for Fluorescence Microcopy using GEM Algorithm

机译:基于GEM算法的荧光显微镜鲁棒盲去卷积

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Fluorescence microscopies have been used as an essential tool in biomedical research, because of better signal to noise ratio compared to other microscopies. Among the various kinds of fluorescence microscopies, wide field fluorescence microscopy (WFFM) and confocal fluorescence microscopy are generally most widely used. While confocal microscopy image has higher clarity than WFFM, it is not suitable for live cells because of a number of major drawbacks such as photo-bleaching and low image acquisition speed. The purpose of this paper is to obtain clearer live cell images by restoring degraded WFFM image. Many studies have been carried out for the purpose of obtaining clearer live cell images by restoring degraded WFFM images, while most of them are not based on regularized MLE (Maximum likelihood estimator) which restores the image by maximizing Poisson likelihood. However, the MLE method is not robust to noise because of ill posed problems. Actually, Gaussian as well as Poisson noise exists in the WFFM image. There are some approaches to improve noise robustness, but these methods cannot guarantee the convergence of likelihood. The purpose of this paper is to obtain clearer live cell images by restoring degraded WFFM images utilizing a robust deconvolution method for WFFM using generalized expectation maximization (GEM) algorithm that guarantees the convergence of a regularized likelihood. Moreover, we actualized a blind deconvolution that can restore the images and estimate point spread function (PSF) simultaneously, while most other researches assume that the PSF is previously known. We performed the proposed algorithm on fluorescent bead and cell images. Our results show that the proposed method restores more accurately than existing methods.
机译:荧光显微镜已被用作生物医学研究中的重要工具,因为与其他显微镜相比,信噪比更好。在各种荧光显微镜中,广域荧光显微镜(WFFM)和共聚焦荧光显微镜通常被最广泛地使用。虽然共聚焦显微镜图像比WFFM具有更高的清晰度,但由于存在许多主要缺点(例如光漂白和低图像采集速度),因此它不适用于活细胞。本文的目的是通过还原退化的WFFM图像来获得更清晰的活细胞图像。为了通过恢复退化的WFFM图像来获得更清晰的活细胞图像,已经进行了许多研究,而大多数研究都不基于正则化MLE(最大似然估计器),后者通过最大化泊松似然来恢复图像。但是,由于不适定问题,MLE方法对噪声不稳健。实际上,WFFM图像中存在高斯噪声和泊松噪声。有一些方法可以提高噪声的鲁棒性,但是这些方法不能保证似然性的收敛。本文的目的是通过使用可靠的去卷积方法对WFFM进行恢复,通过使用退化的WFFM图像来恢复图像,从而获得更清晰的活细胞图像,该方法使用可保证正则似然收敛的广义期望最大化(GEM)算法。此外,我们实现了一种盲反卷积,可以同时恢复图像并估计点扩散函数(PSF),而其他大多数研究都假定PSF以前是已知的。我们对荧光珠和细胞图像执行了建议的算法。我们的结果表明,所提出的方法比现有方法更准确地还原。

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