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Robust Blind Deconvolution for Fluorescence Microcopy using GEM Algorithm

机译:使用GEM算法的荧光显微镜的鲁棒盲卷积

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Fluorescence microscopies have been used as an essential tool in biomedical research, because of better signal to noise ratio compared to other microscopies. Among the various kinds of fluorescence microscopies, wide field fluorescence microscopy (WFFM) and confocal fluorescence microscopy are generally most widely used. While confocal microscopy image has higher clarity than WFFM, it is not suitable for live cells because of a number of major drawbacks such as photo-bleaching and low image acquisition speed. The purpose of this paper is to obtain clearer live cell images by restoring degraded WFFM image. Many studies have been carried out for the purpose of obtaining clearer live cell images by restoring degraded WFFM images, while most of them are not based on regularized MLE (Maximum likelihood estimator) which restores the image by maximizing Poisson likelihood. However, the MLE method is not robust to noise because of ill posed problems. Actually, Gaussian as well as Poisson noise exists in the WFFM image. There are some approaches to improve noise robustness, but these methods cannot guarantee the convergence of likelihood. The purpose of this paper is to obtain clearer live cell images by restoring degraded WFFM images utilizing a robust deconvolution method for WFFM using generalized expectation maximization (GEM) algorithm that guarantees the convergence of a regularized likelihood. Moreover, we actualized a blind deconvolution that can restore the images and estimate point spread function (PSF) simultaneously, while most other researches assume that the PSF is previously known. We performed the proposed algorithm on fluorescent bead and cell images. Our results show that the proposed method restores more accurately than existing methods.
机译:由于与其他显微镜相比,荧光显微镜被用作生物医学研究中的基本工具。在各种荧光显微镜中,通常使用宽场荧光显微镜(WFFM)和共聚焦荧光显微镜。虽然共聚焦显微镜图像比WFFM具有更高的清晰度,但由于许多主要缺点,例如光漂白和低图像采集速度,它不适合活细胞。本文的目的是通过恢复DRADADed WFFM映像来获得更清晰的Live Cell图像。已经进行了许多研究,目的是通过恢复降级的WFFM图像获得更清晰的Live Cell图像,而大多数不是基于正则化的MLE(最大似然估计器),通过最大化泊松可能性来恢复图像。然而,由于存在不良问题,MLE方法对噪声并不稳健。实际上,WFFM图像中存在高斯和泊松噪声。有一些方法可以提高噪音稳健性,但这些方法不能保证可能性的趋同。本文的目的是通过使用广义期望最大化(GEM)算法利用WFFM的鲁棒解卷积方法来获得更清晰的WFFM图像来获得更清晰的WFFM图像,以保证正则化可能性的融合。此外,我们实现了一种盲解码卷积,可以同时恢复图像和估计点传播功能(PSF),而大多数其他研究假定PSF先前已知。我们在荧光珠和细胞图像上进行了所提出的算法。我们的结果表明,该方法比现有方法更准确地恢复。

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