首页> 外文会议>Bioinformatics and Biomedical Engineering , 2009. ICBBE 2009 >Analysis rDNA ITS Sequence of Two High Quality Strains of Agaricus bisporus
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Analysis rDNA ITS Sequence of Two High Quality Strains of Agaricus bisporus

机译:两种双孢蘑菇优质菌株的rDNA ITS序列分析

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Agaricus bisporus is a delicious, nutritious mushroom with medical function. Cross breeding is limited due to its taxonomic contradiction. We analyzed rDNA ITS sequences of two high quality Agaricus bisporus strains (No.Tb07, As2796). Tb07 strain was selected from foreign mushroom by CSUFT under protection. As2796 strain was a high quality local strain in nature in China. By sequencing the ITS regions and comparing with those sequences from Genebank by BLAST search, the results concluded that the ITS region length of Tb07 strain was 701 bp and As2796 strain 695 bp. GC content ranged from 41.72% to 42.22% in ITS1 region and 43.89% to 44.31% in ITS2 region. ITS1 and ITS2 sequences of two strains had seven bp differences. Tb07 strain had 314 bp in ITS1 and 262 bp in ITS2, As2796 strain had 315 bp in ITS1 and 255 bp in ITS2. It suggested that in natural population of Agaricus bisporus had a little variation. From ITS sequence differences, we can select two parents which have a distance relationship for cross breeding. It was important to explore its wild germ plasm resource and increased its genetic variation using cross breeding with aid of molecular data.
机译:双孢蘑菇是一种具有医疗功能的美味营养蘑菇。杂交育种由于其分类学上的矛盾而受到限制。我们分析了两种高质量双孢蘑菇菌株(No.Tb07,As2796)的rDNA ITS序列。在保护下,通过CSUFT从外来蘑菇中选择了Tb07菌株。 As2796菌株是中国自然界中的一种高质量的本地菌株。通过对ITS区域进行测序并通过BLAST搜索与Genebank中的序列进行比较,结果得出Tb07菌株的ITS区域长度为701 bp,As2796菌株的ITS区域长度为695 bp。 GC含量在ITS1区为41.72%至42.22%,在ITS2区为43.89%至44.31%。两个菌株的ITS1和ITS2序列有7 bp的差异。 Tb07菌株在ITS1中具有314 bp,在ITS2中具有262 bp,As2796菌株在ITS1中具有315 bp,在ITS2中具有255 bp。这表明双孢蘑菇的自然种群中存在少许变异。从ITS序列差异中,我们可以选择两个具有距离关系的亲本进行杂交育种。重要的是,通过分子数据的交叉育种来探索其野生种质资源并增加其遗传变异。

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