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ANTIBODY LIBRARY CONSTRUCTION METHOD AND DEVICE BASED ON DEEP LEARNING

机译:基于深度学习的抗体库构建方法及装置

摘要

An antibody library construction method based on deep learning, comprising the steps of: obtaining a corresponding relation among antigen epitopes, antigen recognition regions and coding genes, and constructing a first database matching with the antigen epitopes, the antigen recognition regions and the coding genes; processing the antigen epitopes; carrying out clustering and characteristic extraction on the first database; and taking the multi-dimensional vector as the input of a temporal convolutional neural network, and stopping training until the error is lower than the threshold and tends to be stable to obtain the trained neural network model; and screening out antibody sequences having different activities, stability and specificity to the antigens in the coding gene sequence set X according to molecular docking, molecular dynamics and an existing gene sequence database Y so as to establish a secondary antibody library.
机译:一种基于深度学习的抗体库构建方法,包括以下步骤:获取抗原表位、抗原识别区域和编码基因之间的对应关系,并构建与抗原表位、抗原识别区域和编码基因匹配的第一数据库;处理抗原表位;对第一个数据库进行聚类和特征提取;将多维向量作为时间卷积神经网络的输入,停止训练,直到误差低于阈值并趋于稳定,以获得训练后的神经网络模型;根据分子对接、分子动力学和现有基因序列数据库Y,筛选出对编码基因序列集X中抗原具有不同活性、稳定性和特异性的抗体序列,建立二级抗体库。

著录项

  • 公开/公告号US2022189582A1

    专利类型

  • 公开/公告日2022-06-16

    原文格式PDF

  • 申请/专利权人 CUSABIO TECHNOLOGY LLC;

    申请/专利号US202117353879

  • 发明设计人 QUANGAO HUA;QIN SHU;

    申请日2021-06-22

  • 分类号G16B35/10;G16B40;

  • 国家 US

  • 入库时间 2022-08-25 01:34:41

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