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REPORT INTERPRETATION METHOD AND SYSTEM FOR STRUCTURAL VARIATIONS IN SAMPLE DATA OF PATIENT

机译:报告患者样本数据结构变化的解释方法和系统

摘要

A report interpretation method and system for structural variations in sample data of a patient, which may accurately interpret sample data of patients, and improve interpretation efficiency while reducing the report interpretation threshold. The method comprises: acquiring sample data to be tested of a patient; comparing a gene sequence to a reference baseline, detecting a plurality of structural variations in the sample data and annotating same one by one, and obtaining the pathogenicity classification of each structural variation according to the annotation results; constructing a gene recommendation list by grabbing relevant disease genes from public databases and literature databases according to the disease names and/or clinical features in feature set I; traversing feature set A corresponding to each standard disease name in a feature relation database, calculating a set similarity value of each of feature set A and feature set I separately, and recommending a plurality of standard disease names according to the size of the similarity values; and outputting the plurality of structural variations in descending order on the basis of the importance of influencing factors corresponding to the structural variations, and generating an interpretation report.
机译:一种报告解释方法和系统,用于患者样本数据的结构变化,可以准确地解释患者的样本数据,并提高解释效率,同时减少报告解释阈值。该方法包括:获取待测患者的样本数据;将基因序列与参考基线进行比较,检测样本数据中的多个结构变化并逐一注释相同,并根据注释结果获得每个结构变化的致病性分类;根据特征集I的疾病名称和/或临床特征,通过从公共数据库和文献数据库中抓住相关疾病基因来构建基因推荐清单;遍历特征将对应于特征关系数据库中的每个标准疾病名称的特征设置,计算每个特征集A和特征设置I的设置相似度值,并根据相似度值的大小推荐多个标准疾病名称;并基于对对应于结构变体的影响因素的重要性以及生成解释报告,从降序输出降序的多个结构变型。

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