setting a group of nucleotide sequences among the predetermined range of nucleotide sequences; setting a range of nucleotide sequences in the group of nucleotide sequences; selecting first candidate probes having a certain length within the range of nucleotide sequences; selecting second candidate probes whose melting temperature with target nucleic acids for the first candidate probes is in an appropriate range; selecting third candidate probes whose melting temperature with a specific set of nucleotide sequences is lower than a hybridization temperature; and selecting fourth candidate probes, wherein a secondary structure of each fourth candidate probe has a melting temperature lower than the hybridization temperature by approximately 5° C. to approximately 10° C. and higher than a temperature that is lower than the hybridization temperature by approximately 5° C. to approximately 10° C."/> Method Selecting Highly Specific Probes For HPV Genotype Analysis and the Probes Thereof
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Method Selecting Highly Specific Probes For HPV Genotype Analysis and the Probes Thereof

机译:用于HPV基因型分析的高特异性探针的选择方法及其探针

摘要

A method for selecting a highly specific probe among a predetermined range of nucleotide sequences comprises:setting a group of nucleotide sequences among the predetermined range of nucleotide sequences; setting a range of nucleotide sequences in the group of nucleotide sequences; selecting first candidate probes having a certain length within the range of nucleotide sequences; selecting second candidate probes whose melting temperature with target nucleic acids for the first candidate probes is in an appropriate range; selecting third candidate probes whose melting temperature with a specific set of nucleotide sequences is lower than a hybridization temperature; and selecting fourth candidate probes, wherein a secondary structure of each fourth candidate probe has a melting temperature lower than the hybridization temperature by approximately 5° C. to approximately 10° C. and higher than a temperature that is lower than the hybridization temperature by approximately 5° C. to approximately 10° C.
机译:一种在预定范围的核苷酸序列中选择高度特异性探针的方法,包括: 在核苷酸序列的预定范围内设置一组核苷酸序列;在核苷酸序列组中设置核苷酸序列的范围;在核苷酸序列范围内选择具有一定长度的第一候选探针;选择与所述第一候选探针的靶核酸的解链温度在合适范围内的第二候选探针;选择第三组候选探针,其具有一组特定核苷酸序列的解链温度低于杂交温度;以及选择第四候选探针,其中每个第四候选探针的二级结构的熔解温度比杂交温度低约5℃至约10℃,并且比比杂交温度低约2℃ 5°C到大约10°C。

著录项

  • 公开/公告号US2009088344A1

    专利类型

  • 公开/公告日2009-04-02

    原文格式PDF

  • 申请/专利权人 YONG-KU CHO;CHANG-IL HWANG;

    申请/专利号US20050917263

  • 发明设计人 YONG-KU CHO;CHANG-IL HWANG;

    申请日2005-07-05

  • 分类号C40B40/06;G01N33/50;C07H21/00;

  • 国家 US

  • 入库时间 2022-08-21 19:32:35

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