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Simple method and kit for DNA profiling of HLA genes by high-throughput massively parallel sequencer

机译:通过高通量大规模平行测序仪对HLA基因进行DNA分析的简单方法和试剂盒

摘要

[Problem] The present invention addresses the problem of providing a method and kit for the DNA profiling of HLA genes using a high-throughput massively parallel sequencer. [Solution] The present invention pertains to a method for the DNA profiling of HLA genes, said method being characterized by including: (1) a step for preparing a primer set that anneals specifically to exon 4 and intron 1 and includes exon 2 and exon 3 of at least one target gene selected from the group consisting of HLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DRB5, HLA-DQB1 and HLA-DPB1 in the base sequence of the human genome; (2) a step for amplifying a sample (DNA) by PCR using the primer set; (3) a step for determining the base sequence of the amplified PCR product; and (4) a step for carrying out a homology search against a database.
机译:[问题]本发明解决了提供使用高通量大规模平行测序仪对HLA基因进行DNA谱分析的方法和试剂盒的问题。 [解决方案]本发明涉及用于HLA基因的DNA谱分析的方法,所述方法的特征在于包括:(1)制备引物组的步骤,所述引物组专门与外显子4和内含子1退火,并且包括外显子2和外显子。在人类基因组的碱基序列中的至少一种选自HLA-DRB1,HLA-DRB3,HLA-DRB4,HLA-DRB5,HLA-DQB1和HLA-DPB1的靶基因; (2)使用引物组通过PCR扩增样品(DNA)的步骤; (3)确定扩增的PCR产物的碱基序列的步骤; (4)对数据库进行同源搜索的步骤。

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