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miRNA Detecting method for controlling miRNA and its application of biomarker for colon cancer

机译:控制miRNA的miRNA检测方法及其生物标志物在结肠癌中的应用

摘要

The present invention relates to: 1) a first step of extracting miRNA from an unknown bio sample; 2) a second step of obtaining miRNA data according to the expression level of the sequenced miRNA from the miRNA extracted in the first step; 3) acquiring tumor miRNA data for each expression level using a data platform from a whole milk map (TGCA); 4) obtaining miRNA results (1) for each expression level by comparing the expression level-specific miRNA data obtained in the second step with the expression level-specific tumor miRNA data obtained in the third step; 5) a fifth step of sequencing the miRNA result (1) according to the expression level obtained in the fourth step from 5 folds or more, 2.5 folds or more to less than 2.5 folds from less than 5 folds; 6) obtaining a rearranged miRNA result (2) from the sequenced miRNA data of the third step only at the expression level of 5 fold or more; 7) obtaining a list of cancer suppressor genes from the cancer suppressor gene database, and comparing the obtained cancer suppressor gene list and the sorted miRNA results (2) to obtain cancer screening gene screening results from common results; 8) comparing the results of the reordered miRNA obtained in the sixth step and (2) the results of screening the cancer suppressor gene obtained in the seventh step to obtain a common result by comparing the cancer suppressor gene with a target prediction database; 9) detecting a regulated miRNA ID for controlling a tumor suppressor gene from the common result obtained in the eighth step; And a method for detecting a regulatory miRNA for controlling a tumor suppressor gene. Furthermore, the present invention can be applied to colon cancer biomarkers and therapeutic agents by detecting colon cancer-controlling miRNAs.
机译:本发明涉及:1)从未知生物样品中提取miRNA的第一步; 2)第二步,根据第一步提取的miRNA的测序miRNA的表达水平,获得miRNA数据; 3)使用数据平台从全乳图(TGCA)获取每个表达水平的肿瘤miRNA数据; 4)通过比较第二步中获得的表达水平特异性miRNA数据与第三步中获得的表达水平特异性肿瘤miRNA数据,获得每个表达水平的miRNA结果。 5)根据在第四步骤中获得的表达水平对miRNA结果(1)进行测序的第五步,从5倍或更高,2.5倍或更高到从低于5倍到低于2.5倍; 6)仅以5倍或更高的表达水平从第三步的测序miRNA数据获得重排的miRNA结果(2); 7)从癌症抑制基因数据库中获得癌症抑制基因列表,并将获得的癌症抑制基因列表与分类的miRNA结果进行比较(2),从共同结果中获得癌症筛查基因筛查结果; 8)比较在第六步骤中获得的重排的miRNA的结果和(2)通过将第七步骤中获得的癌抑制基因的筛选结果与目标预测数据库进行比较,从而获得共同的结果; 9)从第八步骤中获得的共同结果中检测用于控制肿瘤抑制基因的调节miRNA ID;一种检测用于控制肿瘤抑制基因的调控miRNA的方法。此外,通过检测控制结肠癌的miRNA,可以将本发明应用于结肠癌生物标志物和治疗剂。

著录项

  • 公开/公告号KR20180035383A

    专利类型

  • 公开/公告日2018-04-06

    原文格式PDF

  • 申请/专利权人 전주대학교 산학협력단;

    申请/专利号KR20160125376

  • 发明设计人 이정상;강진욱;손유경;

    申请日2016-09-29

  • 分类号C12Q1/68;G06F19/22;

  • 国家 KR

  • 入库时间 2022-08-21 12:40:26

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