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Base sequence determination apparatus, capillary array electrophoresis apparatus, and method

机译:碱基序列确定装置,毛细管阵列电泳装置和方法

摘要

This base sequencer comprises: (1) a mobility correction unit which outputs mobility correction signals obtained by mobility correction of a time-series signal of a wavelength spectrum corresponding to each base; (2) a deconvolution unit which executes processes of calculating a post-deconvolution signal of the mobility correction signal for a plurality of candidate parameters of point spread functions, calculating the dispersion of peak intervals of the calculated post-deconvolution signal, specifying a parameter of a point spread function using the calculated dispersion, and outputting a deconvolution signal corresponding to the point spread function having the specified parameter as an updated post-deconvolution signal; (3) a peak extraction unit which extracts a peak waveform from the updated post-deconvolution signal and outputs an updated post-peak extraction signal; and (4) a sequence determination unit which inputs the updated post-peak extraction signal and determines a base sequence.
机译:该碱基定序器包括:(1)迁移率校正单元,其输出通过对与每个碱基相对应的波长谱的时序信号的迁移率校正而获得的迁移率校正信号; (2)解卷积单元,其执行以下处理:针对点扩展函数的多个候选参数计算迁移率校正信号的解卷积后信号;计算所计算出的解卷积后信号的峰值间隔的离散度,并指定参数:使用计算出的色散的点扩展函数,并输出与具有指定参数的点扩展函数相对应的解卷积信号作为更新的解卷积后信号; (3)峰值提取单元,其从更新后的去卷积信号中提取峰值波形并输出更新后的峰值后提取信号; (4)序列确定单元,其输入更新后的峰后提取信号并确定基本序列。

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