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MOLECULAR DOCKING CLOUD COMPUTING PROCESS CONTROL METHOD

机译:分子对接云计算过程控制方法

摘要

Disclosed is a molecular docking cloud computing process control method, belonging to the field of high-throughput molecular docking and virtual screening computing. The method comprises: (1) importing an original database into a MongoDB database, and then calling a yoda library function to obtain, by means of processing, an input structure file for molecular docking; (2) calling the yoda library function to automatically generate a corresponding molecular docking input parameter file; (3) calling a mixc library function, submitting a task to a Majorana task scheduling platform, and submitting the task to a specified cloud computing platform; (4) adding a monitoring task to a task corresponding to each structure, and once the execution of all tasks is completed, calling a data analysis program such that same automatically analyzes a molecular docking resu and (5) acquiring a corresponding analysis result from the MongoDB database to make a corresponding curve. The method realizes cross-platform scheduling, continuous computation, storage, monitoring, result analysis, graphical processing, etc. of a large amount of highly parallel computing tasks, such as molecular docking and virtual screening.
机译:本发明公开了一种分子对接云计算过程控制方法,属于高通量分子对接和虚拟筛选计算领域。该方法包括:(1)将原始数据库导入MongoDB数据库,然后调用尤达文库函数,通过处理的方式获取分子对接的输入结构文件; (2)调用yoda库函数自动生成相应的分子对接输入参数文件; (3)调用mixc库函数,将任务提交给Majorana任务调度平台,并将任务提交给指定的云计算平台; (4)在与每个结构相对应的任务上添加监视任务,一旦完成所有任务的执行,调用数据分析程序,使其自动分析分子对接的结果; (5)从MongoDB数据库中获取相应的分析结果以绘制相应的曲线。该方法实现了诸如分子对接和虚拟筛选等大量高度并行计算任务的跨平台调度,连续计算,存储,监控,结果分析,图形处理等。

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