The method and system for the payment of government subsidies are provided. In the method of paying a government subsidy according to an embodiment of the present invention, in a method of paying a government subsidy to a lower subsidiary business operator performing a subsidiary business of an upper subsidiary business using a government subsidy payment server, the subsidy payment server Selecting the sub-subsidiary business operator to perform the subsidiary business according to a preset criterion, determining, by the government subsidy payment server, issuing the national treasury subsidy to the selected sub subsidiary business, the subsidiary subsidy payment server Registering an execution request for the expenditure of the national treasury subsidy using the expenditure information generated by performing the subsidiary project, and the government subsidy payment server selects the government subsidy deposited in the depository institution according to the registered execution request And transferring to an account of the subordinate subsidiary business operator.
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