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Mathematical modelling and analysis of calcium oscillations in excitable and non-excitable cell lines

机译:可兴奋和不可兴奋细胞系中钙振荡的数学建模和分析

摘要

Information is transmitted from the cell surface to various specific targets in the cell via several cellular signaling pathways. Cytosolic free calcium (Ca2+)is one ofthe most versatile and ubiquitous intracellular messengers since it is able to regulatediverse number of functions such as proliferation, secretion, fertilization, metabolism,learning and memory. In the last couple of years, evidence has been accumulatingthat Ca2+ ion is able to integrate information from multiple signaling pathways andconvert this information into a code which regulates events ranging from contractionto modification of gene expression (Berridge et al. 1998). It was shown that Ca2+concentration displays oscillatory behavior in response to agonist stimulation in avariety of cells(Goldbeter 1996) and the frequency of these oscillations increases withthe concentration of agonist, a behavior called frequency encoding which has led to theconcept that many Ca2+-regulated processes are controlled by these codes(Berridge1998).Although the presence of Ca2+ oscillations and the sources of Ca2+ pools involvedis known in many cell types, it is yet not known how the various frequencies ofCa2+ oscillations are converted into codes that regulate the numerous cellular events.Recently a number of cellular targets that decode Ca2+ signals and are tuned tothe frequency of Ca2+ oscillations have been identified. Prominent among them are calcium-calmodulin kinase II (CAM II) and protein kinase C (PKC).The objective of this work is to study and mathematically model the oxytocinand vasopressin-induced Ca2+ oscillations in cells of normal rat liver (Clone 9) andcells of pregnant human myometrium. The proposed model accounts for the receptor-controlledCa2+ oscillations involving positive feedback leading to activation of phospholipaseC (PLC) and negative feedback from PKC onto G-proteins which simulatesmany of the features of observed intracellular Ca2+. The model also incorporatesthe concept that coordinated Ca2+ signals in a group of hepatocytes require botheffective gap junctions and the presence of agonist at each cell surface. Another objectiveof this research is to understand the relevance of frequency-encoded signalsby performing an analysis of frequencies of Ca2+ oscillations using the Fast FourierTransform and the Wavelet Transform. The validity of the model was confirmed byusing statistical tests to check if the frequencies and amplitudes of the experimentalCa2+ oscillations match with those of the modelled oscillations.
机译:信息通过几种细胞信号传导途径从细胞表面传递至细胞中的各种特定靶标。胞质游离钙(Ca2 +)是最通用和普遍存在的细胞内信使之一,因为它能够调节多种功能,例如增殖,分泌,受精,代谢,学习和记忆。在最近几年中,越来越多的证据表明,Ca2 +离子能够整合来自多种信号通路的信息,并将该信息转化为调控从收缩到基因表达修饰的事件的密码(Berridge等,1998)。结果表明,Ca 2+的浓度在多种细胞中表现出对激动剂刺激的振荡行为(Goldbeter 1996),并且这些振荡的频率随着激动剂的浓度而增加,这种称为频率编码的行为导致了许多Ca2 +调节的概念。虽然在许多细胞类型中都知道Ca2 +振荡的存在和所涉及的Ca2 +池的来源,但还不知道如何将Ca2 +振荡的各种频率转换为调节众多细胞事件的代码,这一过程由这些代码控制。最近,已经发现了许多解码Ca2 +信号并被调谐到Ca2 +振荡频率的细胞靶标。其中最重要的是钙钙调蛋白激酶II(CAM II)和蛋白激酶C(PKC)。这项工作的目的是研究并用数学方法模拟催产素和加压素诱导的正常大鼠肝细胞(克隆9)和细胞中Ca2 +振荡。的人类子宫肌层。拟议的模型解释了受体控制的Ca2 +振荡,其中包括导致磷脂酶C(PLC)激活的正反馈和从PKC到G蛋白的负反馈,G蛋白质模拟了观察到的细胞内Ca2 +的许多特征。该模型还结合了这样的概念,即在一组肝细胞中协调Ca2 +信号既需要有效的间隙连接,又需要在每个细胞表面均存在激动剂。这项研究的另一个目的是通过使用快速傅立叶变换和小波变换对Ca2 +振荡频率进行分析,从而了解频率编码信号的相关性。通过使用统计测试来检查实验Ca 2+振荡的频率和幅度是否与建模振荡的频率和幅度相匹配,从而验证了模型的有效性。

著录项

  • 作者

    Hegde Bharati Krishna;

  • 作者单位
  • 年度 2004
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  • 原文格式 PDF
  • 正文语种 en_US
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