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The application of hierarchical cluster analysis for clasifying horseradish genotypes (Armoracia rusticana L.) roots

机译:层次聚类分析在辣根基因型(Armoracia Rustana L.)根分类中的应用

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Horseradish (Armoracia rusticana L.) is a perennial herb belonging to the Brassicaceae family; it contains biologically active substances such as phenolic compounds. The aim of the present research was to clasify horseradish root genotypes, based on the total phenol content and antioxidant properties, using the hierarchical cluster analysis (HCA), and to compare them with clusters obtained from data of the molecular random amplified polymorphic DNA (RAPD) analysis. Plant phenolic compounds are among the most important primary antioxidants. The phenolic composition of plants is affected by different factors such as variety, genotype, climate, harvest time, storage, processing. Nine genotypes of horseradish roots harvested at three different times in the period from August to November 2011 were used. Several statistical methods can be used to assess differences in the horseradish genotypes. Using a univariate statistical analysis and standard deviations for each analyzed variable does not help to get a complete insight into the complex analysis. Multivariate statistical methods are appropriate tools for the analysis of a complex data matrix. The hierarchical cluster analysis (HCA) used in the current research is a simple way of grouping the set of available data by their similarities according to a set of selected variables. No similarities were found by clustering the genotypes according to the content of biologically active compounds and molecular analyses.
机译:辣根是一种多年生草本植物,属于十字花科。它包含生物活性物质,例如酚类化合物。本研究的目的是使用层次聚类分析(HCA),基于总酚含量和抗氧化特性,找出辣根的基因型,并将其与从分子随机扩增多态性DNA(RAPD)数据获得的聚类进行比较。 )分析。植物酚类化合物是最重要的主要抗氧化剂之一。植物的酚类成分受不同因素的影响,例如品种,基因型,气候,收获时间,储存,加工。使用了2011年8月至2011年11月三个不同时间收获的9种辣根根基因型。几种统计方法可用于评估辣根基因型的差异。对每个被分析变量使用单变量统计分析和标准差无助于全面了解复杂分析。多元统计方法是分析复杂数据矩阵的合适工具。当前研究中使用的层次聚类分析(HCA)是一种根据一组选定变量按其相似性对可用数据集进行分组的简单方法。根据生物活性化合物的含量和分子分析对基因型进行聚类,未发现相似之处。

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