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首页> 外文期刊>Silvae Genetica >Evaluation of the growth traits of Toxicodendron vernicifluum progeny based on their genetic groups assigned using new microsatellite markers
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Evaluation of the growth traits of Toxicodendron vernicifluum progeny based on their genetic groups assigned using new microsatellite markers

机译:利用新的微卫星标记分配的遗传基团来评估轮枝毒素的子代的生长特性

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Toxicodendron vernicifluum (Stokes) F. A. Barkley is a tree species cultivated in Japan for production of Japanese lacquer. To facilitate the low-cost improvement of T. vernicifluum, we developed microsatellite markers for DNA fingerprinting and family and lineage reconstruction. Nine useful microsatellites were developed, with 3 to 23 alleles per locus and an expected heterozygosity of 0.162-0.838 based on a commercially planted population that included 783 offspring. Six clusters were detected in this population based on the Bayesian clustering method, and 93 half-sib families were identified using parentage and sibship assignment analysis based on a maximum likelihood method. Many members (40-96%) of large (>= 10) half-sib families included specific clusters, and members from different families included the same clusters. The cluster effect for tree height was more significant than the half-sib family effect using a linear mixed model, although these effects were not significant for other traits (diameter at breast height and number of forked trunks). Based on the findings from pedigree reconstruction, backward selection for tree height seems possible. We discuss the direction of research for improving T. vernicifluum using our proposed approach.
机译:Verxiifluum(Stokes)F. A. Barkley毒素是在日本种植的用于生产日本漆的树种。为了促进低成本的黑斑病菌改进,我们开发了用于DNA指纹图谱以及家族和谱系重建的微卫星标记。开发了九个有用的微卫星,每个基因座具有3至23个等位基因,基于包括783个后代的商业种植种群,预期杂合度为0.162-0.838。基于贝叶斯聚类方法,在该人群中检测到六个聚类,并使用基于最大似然法的亲子关系和同胞关系分配分析,确定了93个半同胞家庭。大型(> = 10)同胞大家庭中的许多成员(40-96%)包括特定的集群,而来自不同家庭的成员具有相同的集群。使用线性混合模型对树高的聚类效应比半同胞家庭效应更为显着,尽管这些效应对其他特征(在胸高处的直径和分叉树干的数量)并不显着。根据谱系重建的发现,似乎可以向后选择树高。我们讨论了使用我们提出的方法改善紫花苜蓿的研究方向。

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