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Molecular identification of cypripedioid orchids in international trade.

机译:国际贸易中拟南芥的分子鉴定。

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Two cypripedioid orchid genera, Paphiopedilum and Phragmipedium, are listed in Appendix I of CITES and are restricted from international trade. Because of their morphological similarity to other genera, however, they may be disguised as belonging to one of the other cypripedioids listed along with other orchids in Appendix II of CITES. Sequence analysis was performed on the internal transcribed spacer region (ITS) of ribosomal DNA of cypripedioid orchids to develop a molecular marker system capable of discriminating among rare species in trade. Molecular analyses concentrated on rare cypripedioid orchids from the genera Paphiopedilum and Phragmipedium, which are known to be poached from the wild and smuggled across international borders disguised as common species. A total of 48 taxa representing two genera (Paphiopedilum, N=43; Phragmipedium, N=5) have been sequenced and compared for distinctiveness. Phylogenetic analyses clearly distinguish between these two genera and among other cypripedioid genera, with 5-10 fixed nucleotide differences reported between genera. Within a genus, sections of closely related taxa are recoverable in phylogenetic analyses, in most cases, with low sequence divergence within sections. ITS sequences available in GenBank have been aligned with data generated for this project, resulting in a comprehensive sequence library of 151 sequences representing all genera of cypripedioid orchids: 70 Paphiopedilum taxa, 16 Phragmipedium taxa, and 14 Cypripedium taxa, as well as representatives from Selenipedium and the monotypic genus Mexipedium (Phragmipedium) xerophyticum. Additionally, several organelle intron regions have been screened for variation among genera and species. Both the chloroplast trnS-M and the mitochondrial NAD1 intron regions, which varied between genera in nucleotide substitutions and indels, hold promise for increasing ability to distinguish between these orchids. The set of DNA markers examined for this project are diagnostic of these genera, appear to be robust, and are suitable for rapid assay to avoid unnecessary complication in the legitimate trade of orchids listed in CITES Appendix II..
机译:《濒危野生动植物种国际贸易公约》(CITES)附录一列出了两个环足类兰花科,兜兰属和芦苇科,它们被禁止国际贸易。但是,由于它们与其他属的形态相似性,它们可能会被伪装成属于《濒危野生动植物种国际贸易公约》附录二中列出的其他拟南芥之一。对拟南芥兰花核糖体DNA的内部转录间隔区(ITS)进行了序列分析,以开发一种分子标记系统,该系统能够区分贸易中的稀有物种。分子分析的重点是兜兰属和芦苇属中稀有的拟南芥兰花,已知它们是从野外偷猎并伪装成常见物种跨国际边界走私的。代表两个属(兜兰,N = 43;芦苇,N = 5)的总共48个分类单元已被测序并比较了其独特性。系统发育分析清楚地区分了这两个属和其他拟南芥属之间,据报道这些属之间有5-10个固定的核苷酸差异。在属内,在大多数情况下,在系统发育分析中可以恢复密切相关的分类单元的部分,而这些部分之间的序列差异较小。 GenBank中提供的ITS序列已与该项目产生的数据进行比对,从而形成了一个包含151个序列的完整序列库,这些序列代表了拟南芥属的所有属:70个兜兰类群,16个芦苇类群和14个Cy兰类群以及硒代植物的代表和单型属旱生植物(Phragmipedium)xerophyticum。此外,已经筛选了几个细胞器内含子区域,以区分属和种。叶绿体trnS-M和线粒体NAD1内含子区域(在核苷酸取代和插入缺失的属之间有所不同)都有望提高区分这些兰花的能力。为该项目检验的一组DNA标记物可诊断这些属,看上去很健壮,并且适合快速测定,以避免在CITES附录II中列出的兰花的合法贸易中造成不必要的复杂化。

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