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Molecular and morphological characterisation of Meloidogyne hapla populations from Ethiopia

机译:埃塞俄比亚根结线虫种群的分子和形态学表征

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Meloidogyne hapla, considered mainly a temperate species, was recently detected parasitising rose plants in glasshouses in Ethiopia. Roses are grown in more than 80% of the existing cut-flower producing farms in Ethiopia. Nevertheless, its production is increasingly facing serious nematode problems. Consequently, soil samples were collected from 12 randomly selected farms distributed in six districts around Addis Ababa. Nine of these farms were positive for Meloidogyne spp. and six were positive for M. hapla. Pure isolates of 125 Meloidogyne spp. from the latter six farms were established from single egg masses on tomato cv. Moneymaker. Based on molecular and morphological data, eightytwo of the isolates were identified as M. hapla. Morphological characters based on light and scanning electron microscope images together with morphometric measurements of females, males and second-stage juveniles (J2) were compared with populations of M. hapla from different countries. In addition, molecular characterisation was performed based on the 28S D2-D3 expansion segments within the ribosomal DNA and the region located between cytochrome oxidase unit II and the 16S rRNA gene of the mitochondria (mtDNA). Morphological characters of females, males and J2 were in line with descriptions of other M. hapla populations but there were a few exceptions in morphometric measurements. The female perennial pattern of the Ethiopian populations fitted the original description but was smaller than that of the population described by Jepson. The J2 body size was larger compared to previous descriptions from Hawaii and East Africa and the a ratio value was much greater than for the East African population but similar to the Hawaiian population. Phylogenetic relationships of the Ethiopian M. hapla population with other related Meloidogyne species on the bases of both mtDNA and D2-D3 expansion segment sequence analysis revealed highly supported clades containing the Ethiopian isolates as well as other published isolates from different countries.
机译:最近发现了主要被认为是温带物种的Meloidogyne hapla在埃塞俄比亚的温室中寄生了玫瑰植物。埃塞俄比亚超过80%的现有切花生产农场都种植玫瑰。然而,其生产越来越面临严重的线虫问题。因此,从分布在亚的斯亚贝巴附近六个地区的12个随机选择的农场收集了土壤样品。这些农场中有9个呈阳性。六个对哈普拉支原体呈阳性。 125个根结线虫属的纯分离株。来自后六个农场的番茄蛋是由单个卵块组成的。摇钱树。根据分子和形态学数据,分离出的八十二个分离物为鼠疫分枝杆菌。将基于光和扫描电子显微镜图像的形态学特征以及雌,雄和二级幼虫(J2)的形态测量结果与不同国家的鼠疫分枝杆菌种群进行了比较。此外,基于核糖体DNA内的28S D2-D3扩展片段以及位于细胞色素氧化酶单元II和线粒体(mtDNA)的16S rRNA基因之间的区域进行了分子表征。雌性,雄性和J2的形态特征与其他鼠疫分枝杆菌种群的描述一致,但形态计量学测量中有一些例外。埃塞俄比亚人口的女性多年生模式符合最初的描述,但小于吉普森描述的人口。与先前来自夏威夷和东非的描述相比,J2的体型更大,并且比率值比东非人口大得多,但与夏威夷人口相似。基于mtDNA和D2-D3扩展片段序列分析,埃塞俄比亚哈普拉氏菌种群与其他相关根结线虫物种的亲缘关系揭示了高度支持的进化枝,其中包含埃塞俄比亚分离株以及其他国家/地区的其他分离株。

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