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Trends of amino acid adsorption onto graphene and graphene oxide surfaces: a dispersion corrected DFT study

机译:氨基酸在石墨烯和氧化石墨烯表面的吸附趋势:分散校正的DFT研究

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摘要

First-principle calculations based on density functional theory were performed to investigate the adsorption properties of amino acids onto graphene surfaces. The GGA-PBE scheme with inclusion of van der Waals interactions based on a DFT-D2 approach was employed in these calculations. Several types of graphene monolayers such as perfect, defected and oxidized graphene were considered in this study and the extent and strength to which these amino acids were bound to the monolayers were explored. The accuracy of our method was validated by the state-of-the-art MP2 and hybrid B3LYP levels of theory. Based on the obtained results, the strongest interactions took place among the negatively polarized oxygen atom of the oxidized graphene and positively polarized parts of the amino acid molecules, i.e. hydrogen atoms of the -NH and -OH parts. On the other hand, the weakest interaction was attained among the delocalized pi electrons from the aromatic parts of the amino acids and lone-pair electrons of the oxygen atom in oxidized graphene. Furthermore, the long range dispersion forces were found to play significant roles in the considered systems. Investigations about the role of solvation in calculations revealed that the zwitterionic conformer of glycine binds more strongly to the graphene surface in the presence of water molecules in comparison to its neutral form by an energy difference of about -4.82 kJ mol(-1). The calculated geometrical parameters, binding energies and electronic structure analysis results all suggest the existence of non-covalent interactions among all of the considered species.
机译:进行了基于密度泛函理论的第一性原理计算,以研究氨基酸在石墨烯表面的吸附性能。在这些计算中,采用了基于DFT-D2方法的包括范德华相互作用的GGA-PBE方案。在这项研究中考虑了几种类型的石墨烯单层,如完全,缺陷和氧化石墨烯,并探讨了这些氨基酸与单层结合的程度和强度。我们的方法的准确性已通过最新的MP2和混合B3LYP理论水平进行了验证。根据所获得的结果,在氧化石墨烯的负极化氧原子与氨基酸分子的正极化部分,即-NH和-OH部分的氢原子之间发生最强的相互作用。另一方面,在氧化的石墨烯中,氨基酸的芳香族部分离域的pi电子与氧原子的孤对电子之间的相互作用最弱。此外,发现远程分散力在所考虑的系统中起着重要作用。关于溶剂化在计算中的作用的研究表明,与水的中性形式相比,甘氨酸的两性离子构象异构体在存在水分子时更牢固地与石墨烯表面结合,其能量差约为-4.82 kJ mol(-1)。计算得到的几何参数,结合能和电子结构分析结果均表明所有考虑物种之间均存在非共价相互作用。

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