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Testing genetic determinism in rate of hoof growth in pigs using Bayes Factors

机译:使用贝叶斯因子测试猪蹄生长率的遗传决定论

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摘要

Excessive growth and consequent deformity of hooves is a frequent disorder in some purebred pig populations. A test to detect possible genetic determinism related with this phenomenon was performed using the Bayes Factor (BF). Data were available forfemales from three purebred selection lines: Landrace (561 records), Pietrain (183) and Large White (225). Animals were scored in four categories, according to the overall growth rate of their hooves. A Bayesian analysis was performed separately for eachline using a threshold model with a probit approach, and Bayes Factors between models with and without additive genetic effects were computed. Results from the three lines showed that models exhibiting genetic variability were much more probable than those that did not include a genetic component, with BF values of 312, 35 and 40 (and posterior probabilities of 0.99, 0.97 and 0.98), respectively, for the Landrace, Pietrain and Large White lines. Monte Carlo estimates of posterior means of heritabilities were medium to high (0.25, 0.41 and 0.38, respectively), and the highest posterior density region for heritability at 99% did not include zero in any of the three lines. These results allow us to conclude that genetic determinism has an important influence upon the rate of hoof growth in the pig. A potential genetic response can be achieved in the populations analysed, but further studies are needed to determine the genetic architecture of hoof growth disorders in pigs.
机译:在某些纯种猪种群中,蹄的过度生长和随之而来的畸形是常见的疾病。使用贝叶斯因子(BF)进行了检测与该现象相关的可能遗传确定性的测试。可获得来自三个纯种选择系的女性数据:Landrace(561条记录),Pietrain(183条)和Large White(225条)。根据蹄的总体生长速度,将动物分为四个类别。使用阈值模型和概率模型分别对每条线进行贝叶斯分析,并计算具有和没有加性遗传效应的模型之间的贝叶斯因子。这三行结果表明,具有遗传变异性的模型比不包含遗传成分的模型更有可能,BF值分别为312、35和40(后验概率分别为0.99、0.97和0.98)。长白,Pietrain和大白线。蒙特卡洛对遗传力的后验均值的估计为中到高(分别为0.25、0.41和0.38),遗传力的最高后验密度区域(99%)在三行中均不包括零。这些结果使我们得出结论,遗传决定论对猪蹄的生长速率具有重要影响。在分析的群体中可以实现潜在的遗传反应,但是还需要进一步的研究来确定猪蹄生长障碍的遗传结构。

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