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Study of the Evolutionary Relationships among Limonium Species (Plumbaginaceae) Using Nuclear and Cytoplasmic Molecular Markers

机译:利用核和细胞质分子标记研究柠檬属物种(铅科)之间的进化关系

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The genus Limonium, due to the patchiness of the natural habitats of its species as well as the high frequency of hybridization and polyploidy and the possibility of reproduction by apomixis, provides an example of all the principal mechanisms of rapid speciation of plants. An an initial study of evolution in this genus, we have analyzed intra- and interspecific variability in 17 species from section Limonium, the largest in the genus, based on RFLPs of cpDNA and nuclear rDNAITS sequences. In the cpDNA analysis, 21 restriction enzymes were used, resulting in 779 fragments, 490 of which were variable and 339 parsimony informative. L. furfuraceum exhibited two relatively divergent cpDNA haplotypes. The relationships found among the species based on cpDNA restriction fragments were coincident using different methods of phylogenetic analysis. Due to the presumed reticulate evolution in the genus Limonium, the comparison of these results with data from the nuclear DNA was necessary; ITS sequences were analyzed. The final alignment contained 488 characters, of which 198 were variable and 156 parsimony informative. Two relatively divergent ITS types were present at the intraindividual level in L. delicatulum, a triploid species. Each type was related to ITS from different groups of diploid Limonium species, one with a base haploid chromosome number n = 8 (represented by L. cossonianum) and the other with n = 9 (represented by L. minutum). The different phylogenetic inference methods used for the analysis of ITS sequences rendered very similar topologies. In general, the relationships among the species studied were coincident with those obtained with the chloroplast genome. Both nuclear and cytoplasmic markers support the polyphyly of section Limonium, with at least two species, L. narbonense and L. vulgare, clearly divergent from the rest. Moreover, the remaining subsections into which section Limonium is currently divided seem to be artificial.
机译:由于其物种自然栖息地的斑驳,杂交和多倍性的高频率以及无融合生殖繁殖的可能性,Limonium属提供了植物快速物种形成的所有主要机理的例子。在对该属进化的初步研究中,我们基于cpDNA和核rDNAITS序列的RFLP,分析了该属中最大的Limonium切片中17种物种的种内和种间变异性。在cpDNA分析中,使用了21种限制酶,产生了779个片段,其中490个可变且339个简约信息。糠草乳杆菌表现出两种相对不同的cpDNA单倍型。使用不同的系统发育分析方法,基于cpDNA限制性片段的物种之间的关系是一致的。由于推测柠檬草属中的网状进化,因此有必要将这些结果与核DNA的数据进行比较。分析了ITS序列。最终对齐包含488个字符,其中198个可变字符和156个简约信息。在三倍体L. delicatulum的个体内水平上存在两种相对不同的ITS类型。每种类型都与来自不同二倍体柠檬属物种组的ITS相关,一种具有基本单倍体染色体编号n = 8(由coscosonianum代表),另一种具有n = 9(由min。L. minutum代表)。用于ITS序列分析的不同系统发育推断方法呈现出非常相似的拓扑。通常,所研究物种之间的关系与通过叶绿体基因组获得的关系一致。核和细胞质标记物都支持柠檬绿节的多重性,其中至少有两个种:纳本氏乳杆菌和寻常型乳杆菌,明显不同于其他物种。此外,目前将Limonium划分为的其他子节似乎是人为的。

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