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首页> 外文期刊>Molecular phylogenetics and evolution >Systematics and morphological evolution within the moss family Bryaceae: A comparison between parsimony and Bayesian methods for reconstruction of ancestral character states
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Systematics and morphological evolution within the moss family Bryaceae: A comparison between parsimony and Bayesian methods for reconstruction of ancestral character states

机译:苔藓科Bryaceae中的系统学和形态演化:简约和贝叶斯方法重建祖先性状的比较

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The Bryaceae are a large cosmopolitan moss family including genera of significant morphological and taxonomic complexity. Phylogenetic relationships within the Bryaceae were reconstructed based on DNA sequence data from all three genomic compartments. In addition, maximum parsimony and Bayesian inference were employed to reconstruct ancestral character states of 38 morphological plus four habitat characters and eight insertion/deletion events. The recovered phylogenetic patterns are generally in accord with previous phylogenies based on chloroplast DNA sequence data and three major clades are identified. The first clade comprises Bryum bornholmense, B. rubens, B. caespiticium, and Plagiobryum. This corroborates the hypothesis suggested by previous studies that several Bryum species are more closely related to Plagiobryum than to the core Bryum species. The second clade includes Acidodontium, Anomobryum, and Haplodontium, while the third clade contains the core Bryum species plus Imbribryum. Within the latter clade, B. subapiculatum and B. tenuisetum form the sister clade to Imbribryum. Reconstructions of ancestral character states under maximum parsimony and Bayesian inference suggest fourteen morphological synapomorphies for the ingroup and synapomorphies are detected for most clades within the ingroup. Maximum parsimony and Bayesian reconstructions of ancestral character states are mostly congruent although Bayesian inference shows that the posterior probability of ancestral character states may decrease dramatically when node support is taken into account. Bayesian inference also indicates that reconstructions may be ambiguous at internal nodes for highly polymorphic characters.
机译:布莱斯科(Bryaceae)是一个大型的世界性苔藓科,包括明显的形态和分类学复杂性的属。基于来自所有三个基因组区室的DNA序列数据,重建了蔷薇科内的亲缘关系。此外,利用最大简约性和贝叶斯推论重建了38个形态特征加上4个栖息地特征和8个插入/缺失事件的祖先特征状态。基于叶绿体DNA序列数据,恢复的系统发育模式通常与先前的系统发育一致,并且鉴定出三个主要进化枝。第一进化枝包括Bryumbornholmense,B.rubens,B.caespiticium和Plagiobryum。这证实了先前研究提出的假说,即几个Bryum物种与斜纹夜蛾的关系比核心Bryum物种更紧密。第二个进化枝包括Acidodontium,Anomobryum和Haplodontium,而第三个进化枝包含核心的Bryum物种和Imbribryum。在后一个分支中,枯草芽孢杆菌和tenuisetum芽孢杆菌形成了Imbribryum的姐妹分支。在最大简约度和贝叶斯推断下的祖先特征状态的重建表明该群体中有十四种形态上的同形异能,而群体中大多数进化枝都检测到了同形异形。尽管贝叶斯推断表明,当考虑节点支持时,祖先字符状态的后验概率可能会大大降低,但是祖先字符状态的最大简约和贝叶斯重构在大多数情况下是一致的。贝叶斯推断还表明,对于高度多态的字符,内部节点上的重构可能是不明确的。

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