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Molecular phylogenetics and biogeography of Lepus in Eastern Asia based on mitochondrial DNA sequences

机译:基于线粒体DNA序列的东亚天狼疮的分子系统学和生物地理学

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In spite of several classification attempts among taxa of the genus Lepus, phylogenetic relationships still remain poorly understood. Here, we present molecular genetic evidence that may resolve some of the current incongruities in the phylogeny of the leporids. The complete mitochondrial cytb, 12S genes, and parts of ND4 and control region fragments were sequenced to examine phylogenetic relationships among Chinese hare taxa and other leporids throughout the World using maximum parsimony, maximum likelihood, and Bayesian phylogenetic reconstruction approaches. Using reconstructed phylogenies, we observed that the Chinese hare is not a single monophyletic group as originally thought. Instead, the data infers that the genus Lepus is monophyletic with three unique species groups: North American, Eurasian, and African. Ancestral area analysis indicated that ancestral Lepus arose in North America and then dispersed into Eurasia via the Bering Land Bridge eventually extending to Africa. Brooks Parsimony analysis showed that dispersal events followed by subsequent speciation have occurred in other geographic areas as well and resulted in the rapid radiation and speciation of Lepus. A Bayesian relaxed molecular clock approach based on the continuous autocorrelation of evolutionary rates along branches estimated the divergence time between the three major groups within Lepus. The genus appears to have arisen approximately 10.76 MYA (+/- 0.86 MYA), with most speciation events occurring during the Pliocene epoch (5.65 +/- 1.15 MYA similar to 1.12 +/- 10.47 MYA). (c) 2005 Elsevier Inc. All rights reserved.
机译:尽管在类天牛属的分类群中进行了几种分类尝试,但系统发育关系仍然知之甚少。在这里,我们提出了分子遗传学证据,可以解决当前在类脂体系统发育中的一些不一致性。使用最大简约性,最大似然性和贝叶斯系统发育重建方法,对完整的线粒体cytb,12S基因以及部分ND4和控制区片段进行测序,以检查世界范围内中国野兔类群和其他类脂体之间的系统发育关系。使用重建的系统发育史,我们观察到中国野兔不是最初认为的单个单一系统种群。取而代之的是,数据推断天狼疮属是单生的,具有三个独特的物种组:北美,欧亚和非洲。祖先地区的分析表明,祖先的天兔座起源于北美,然后通过白令陆桥(Bering Land Bridge)扩散到欧亚大陆,最终扩展到非洲。 Brooks Parsimony分析表明,在其他地理区域也发生了扩散事件和随后的物种形成,并导致了天牛的快速辐射和物种形成。一种基于进化速度沿分支的连续自相关的贝叶斯松弛分子时钟方法,估计了狼疮内三大类之间的发散时间。该属似乎已出现约10.76 MYA(+/- 0.86 MYA),大多数物种形成事件发生在上新世时期(5.65 +/- 1.15 MYA,类似于1.12 +/- 10.47 MYA)。 (c)2005 Elsevier Inc.保留所有权利。

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