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Genomics of invasion:diversity and selection in introduced populations of monkeyflowers (Mimulus guttatus)

机译:入侵基因组学:引进的猴花种群的多样性和选择(Mimulus guttatus)

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摘要

Global trade and travel is irreversibly changing the distribution of species around the world. Because introduced species experience drastic demographic events during colonization and often face novel environmental challenges from their native range, introduced populations may undergo rapid evolutionary change. Genomic studies provide the opportunity to investigate the extent to which demographic, historical and selective processes shape the genomic structure of introduced populations by analysing the signature that these processes leave on genomic variation. Here, we use next-genera tion sequencing to compare genome-wide relationships and patterns of diversity in native and introduced populations of the yellow monkeyflower (Mimulus guttatus). Genome resequencing data from 10 introduced populations from the United Kingdom (UK) and 12 native M. guttatus populations in North America (NA) demonstrated reduced neutral genetic diversity in the introduced range and showed that UK populations are derived from a geographic region around the North Pacific. A selective-sweep analysis revealed site frequency changes consistent with selection on five of 14 chromosomes, with genes in these regions showing reduced silent site diversity. While the target of selection is unknown, genes associated with flowering time and biotic and abiotic stresses were located within the swept regions. The future identification of the specific source of origin of introduced UK populations will help determining whether the observed selective sweeps can be traced to unsampled native populations or occurred since dispersal across the Atlantic. Our study demonstrates the general potential of genome-wide analyses to uncover a range of evolutionary processes affecting invasive populations.
机译:全球贸易和旅行不可逆转地改变了世界各地物种的分布。由于引进的物种在定居期间会经历剧烈的人口统计学事件,并且经常面临来自其本地范围的新型环境挑战,因此引进的种群可能会经历快速的进化变化。基因组学研究通过分析这些过程在基因组变异上留下的特征,为研究人口,历史和选择性过程在多大程度上影响引入种群的基因组结构提供了机会。在这里,我们使用下一代测序技术来比较全基因组关系和黄色猴花(Mimulus guttatus)原生种群和引进种群的多样性模式。来自英国(UK)的10个引入种群和北美(NA)的12个本地牙形支原体种群的基因组重测序数据表明,引入范围内的中性遗传多样性降低,并表明英国种群来源于北部周围的地理区域太平洋。选择性扫描分析显示位点频率变化与14条染色体中的5条染色体的选择一致,这些区域中的基因显示出沉默位点多样性降低。虽然选择的目标是未知的,但与开花时间以及生物和非生物胁迫相关的基因位于清扫区域内。未来识别引入的英国种群的具体来源的未来来源将有助于确定观察到的选择性扫描是否可以追溯到未采样的本地种群,还是可以自分散在整个大西洋以来发生。我们的研究表明,全基因组分析的潜在潜力可揭示一系列影响侵入种群的进化过程。

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