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Laser capture microdissection of Plasmodium falciparum liver stages for mRNA analysis.

机译:恶性疟原虫肝阶段的激光捕获显微切割,用于mRNA分析。

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Plasmodium falciparum liver-stages are important targets for vaccine-induced protective immune responses and prophylactic treatment against malaria. Little is known of the gene expression profile of malaria parasites during their development inside hepatocytes. The sequencing of the P. falciparum genome and the development of DNA microarray technology give new opportunities to identify genes expressed during the development of Plasmodium. However, transcriptome analysis cannot currently be applied to the hepatic stages, due to difficulties in obtaining sufficient amounts of parasite material that lie among the large excess of host cell RNA. Here, we describe the isolation of liver-stages by a modified laser capture microdissection approach applied to human hepatocyte cultures infected with P. falciparum. RT-PCR amplification of several P. falciparum transcripts demonstrated the high quality of the RNA recovered after microdissection. This approach should enable analyses of P. falciparum transcriptome during its hepatic development and substantially assist the identification of new therapeutic and vaccine targets.
机译:恶性疟原虫肝阶段是疫苗诱导的保护性免疫应答和预防疟疾的重要靶标。疟疾寄生虫在肝细胞内发育期间的基因表达谱知之甚少。恶性疟原虫基因组的测序和DNA微阵列技术的发展为鉴定疟原虫的发展过程中表达的基因提供了新的机会。然而,由于难以获得位于大量过量宿主细胞RNA中的足够量的寄生虫材料,因此转录组分析目前不能应用于肝期。在这里,我们描述了一种改良的激光捕获显微切割方法,将其应用于恶性疟原虫感染的人类肝细胞培养物,从而分离出肝脏。几个恶性疟原虫转录本的RT-PCR扩增表明显微切割后回收的RNA质量很高。这种方法应该能够分析恶性疟原虫的肝发育过程中的转录组,并在很大程度上帮助鉴定新的治疗和疫苗靶标。

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