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Comparative transcriptome analysis of Brucella melitensis in an acidic environment: Identification of the two-component response regulator involved in the acid resistance and virulence of Brucella

机译:酸性环境下布鲁氏菌的比较转录组分析:鉴定涉及布鲁氏菌的耐酸性和毒性的两组分响应调节剂

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Brucella melitensis, encounters a very stressful environment in phagosomes, especially low pH levels. So identifying the genes that contribute to the replication and survival within an acidic environment is critical in understanding the pathogenesis of the Brucella bacteria. In our research, comparative transcriptome with RNA-seq were used to analyze the changes of genes in normal-medium culture and in pH4.4-medium culture. The results reveal that 113 genes expressed with significant differences (vertical bar log2Ratio vertical bar >= 3); about 44% genes expressed as up-regulated. With GO term analysis, structural constituent of the ribosome, rRNA binding, structural molecule activity, and cation-transporting ATPase activity were significantly enriched (p-value 0.05). These genes distributed in 51 pathways, in which ribosome and photosynthesis pathways were significantly enriched. Six pathways (oxidative phosphorylation, iron-transporting, bacterial secretion system, transcriptional regulation, two-component system, and ABC transporters pathways) tightly related to the intracellular survival and virulence of Brucella were analyzed. A two-component response regulator gene in the transcriptional regulation pathway, identified through gene deletion and complementary technologies, played an important role in the resistance to the acid-resistance and virulence of Brucella. (C) 2015 Elsevier Ltd. All rights reserved.
机译:布鲁氏菌在吞噬体中遇到非常紧张的环境,尤其是低pH值。因此,鉴定有助于在酸性环境中复制和存活的基因对于理解布鲁氏菌的发病机理至关重要。在我们的研究中,使用带有RNA-seq的比较转录组来分析正常培养基和pH4.4培养基中基因的变化。结果显示113个基因表达有显着差异(垂直条log2Ratio垂直条> = 3);约44%的基因表达上调。通过GO术语分析,​​核糖体的结构组成,rRNA结合,结构分子活性和阳离子转运ATPase活性显着丰富(p值<0.05)。这些基因分布在51条途径中,其中核糖体和光合作用途径显着丰富。分析了与布鲁氏菌细胞内存活和毒力密切相关的六个途径(氧化磷酸化,铁转运,细菌分泌系统,转录调控,两组分系统和ABC转运蛋白途径)。通过基因缺失和互补技术鉴定的转录调节途径中的两组分响应调节基因在抗布鲁氏菌的耐酸和毒性中起重要作用。 (C)2015 Elsevier Ltd.保留所有权利。

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