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Improved volumetric measurement of brain structure with a distortion correction procedure using an ADNI phantom

机译:使用ADNI体模的畸变校正程序改善了大脑结构的体积测量

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Purpose: Serial magnetic resonance imaging (MRI) images acquired from multisite and multivendor MRI scanners are widely used in measuring longitudinal structural changes in the brain. Precise and accurate measurements are important in understanding the natural progression of neurodegenerative disorders such as Alzheimer's disease. However, geometric distortions in MRI images decrease the accuracy and precision of volumetric or morphometric measurements. To solve this problem, the authors suggest a commercially available phantom-based distortion correction method that accommodates the variation in geometric distortion within MRI images obtained with multivendor MRI scanners. Methods: The authors' method is based on image warping using a polynomial function. The method detects fiducial points within a phantom image using phantom analysis software developed by the Mayo Clinic and calculates warping functions for distortion correction. To quantify the effectiveness of the authors' method, the authors corrected phantom images obtained from multivendor MRI scanners and calculated the root-mean-square (RMS) of fiducial errors and the circularity ratio as evaluation values. The authors also compared the performance of the authors' method with that of a distortion correction method based on a spherical harmonics description of the generic gradient design parameters. Moreover, the authors evaluated whether this correction improves the test-retest reproducibility of voxel-based morphometry in human studies. Results: A Wilcoxon signed-rank test with uncorrected and corrected images was performed. The root-mean-square errors and circularity ratios for all slices significantly improved (p < 0.0001) after the authors' distortion correction. Additionally, the authors' method was significantly better than a distortion correction method based on a description of spherical harmonics in improving the distortion of root-mean-square errors (p < 0.001 and 0.0337, respectively). Moreover, the authors' method reduced the RMS error arising from gradient nonlinearity more than gradwarp methods. In human studies, the coefficient of variation of voxel-based morphometry analysis of the whole brain improved significantly from 3.46% to 2.70% after distortion correction of the whole gray matter using the authors' method (Wilcoxon signed-rank test, p < 0.05). Conclusions: The authors proposed a phantom-based distortion correction method to improve reproducibility in longitudinal structural brain analysis using multivendor MRI. The authors evaluated the authors' method for phantom images in terms of two geometrical values and for human images in terms of test-retest reproducibility. The results showed that distortion was corrected significantly using the authors' method. In human studies, the reproducibility of voxel-based morphometry analysis for the whole gray matter significantly improved after distortion correction using the authors' method.
机译:目的:从多站点和多供应商MRI扫描仪获取的串行磁共振成像(MRI)图像被广泛用于测量大脑的纵向结构变化。准确而准确的测量对于了解神经退行性疾病(例如阿尔茨海默氏病)的自然发展至关重要。但是,MRI图像中的几何畸变会降低体积或形态测量的准确性和精度。为了解决这个问题,作者提出了一种可商购的基于幻像的畸变校正方法,该方法可适应多厂商MRI扫描仪获得的MRI图像中几何畸变的变化。方法:作者的方法基于使用多项式函数的图像变形。该方法使用由Mayo Clinic开发的幻像分析软件检测幻像图像中的基准点,并计算变形函数以校正失真。为了量化作者方法的有效性,作者校正了从多厂商MRI扫描仪获得的幻像图像,并计算了基准误差的均方根(RMS)和圆度比作为评估值。作者还比较了作者方法的性能和基于通用梯度设计参数的球谐函数描述的失真校正方法的性能。此外,作者评估了这种校正是否可以改善人体研究中基于体素的形态测量的重测重现性。结果:对未校正和校正后的图像进行了Wilcoxon符号秩检验。作者进行畸变校正后,所有切片的均方根误差和圆度比均得到了显着改善(p <0.0001)。此外,在改善均方根误差的失真方面,作者的方法明显优于基于球形谐波描述的失真校正方法(分别为p <0.001和0.0337)。而且,与梯度翘曲方法相比,作者的方法减少了由梯度非线性引起的RMS误差。在人类研究中,使用作者的方法对整个灰质进行畸变校正后,基于全体素的基于体素的形态分析的变异系数从3.46%显着提高到2.70%(Wilcoxon符号秩检验,p <0.05) 。结论:作者提出了一种基于幻影的畸变校正方法,以提高使用多供应商MRI进行纵向结构脑部分析的可重复性。作者根据两个几何值评估了作者的幻像图像方法,并根据测试-再测试的可再现性评估了人类图像的方法。结果表明,使用作者的方法可以显着纠正失真。在人体研究中,使用作者的方法校正失真后,基于体素的形态分析对于整个灰质的可重复性显着提高。

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