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A Crassostrea gigas Toll-like receptor and comparative analysis of TLR pathway in invertebrates

机译:无脊椎动物Crassostrea gigas Toll样受体和TLR途径的比较分析

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Toll-like receptor (TLR) signaling pathway was an important and evolutionarily conserved innate immune pathway. Evolutionary lineage of this pathway in the Lophotrochozoans is still less understood. In this study, we cloned a novel TLR, a key component of TLR pathway, from Crassostrea gigas, and named it CgToll-1. The 4343 base pairs full-length cDNA was assembled with the 3a super(2) and 5a super(2) RACE (rapid amplification of cDNA ends) PCR results, and containing a 3540aabp open reading frame, which encoding a putative TLR protein of 1179 amino acid residues. Real-time reverse transcription polymerase chain reaction analysis revealed that the highest CgToll-1 expression level was in hemolymph, and the expression pattern in hemolymph dramatically increased in the presence of bacteria Vibrio anguillarum. Furthermore, TLR pathway core genes of mollusks were searched and compared with model invertebrates. Phylogenetic trees of two downstream genes (II[ordmB, Rel) showed that mollusks genes were closer to Drosophila melanogaster than Strongylocentrotus purpuratus, while three upstream genes (MyD88, IRAK, TRAF6) showed the opposite propensity. We have also detected that these two downstream genes were significantly more conservative than the three upstream genes based on amino acid sequence alignment. We found no significant difference between the codon usage biases of TLR pathway genes. This study suggests that CgToll-1 was a constitutive and inducible protein and thus could play an important role in the immune responses against bacterium infection. Besides, comparative analysis of TLR pathway showed that gene loss and divergence might exist during evolution in invertebrate.
机译:Toll样受体(TLR)信号传导途径是重要的且在进化上保守的先天免疫途径。尚在恶风子虫中此途径的进化谱系还知之甚少。在这项研究中,我们从Crassostrea gigas克隆了一种新的TLR(TLR途径的关键组成部分),并将其命名为CgToll-1。 4343个碱基对的全长cDNA与3a super(2)和5a super(2)RACE(cDNA末端的快速扩增)PCR结果组装在一起,并包含3540aabp的开放阅读框,其编码推定的TLR蛋白1179氨基酸残基。实时逆转录聚合酶链反应分析表明,CgToll-1的最高表达水平是在血淋巴中,并且在存在鳗弧菌的情况下血淋巴中的表达模式急剧增加。此外,搜索了软体动物的TLR途径核心基因,并将其与无脊椎动物模型进行了比较。两个下游基因(II [ordmB,Rel])的系统进化树显示,软体动物基因比黑腹果蝇更接近果蝇,而三个上游基因(MyD88,IRAK,TRAF6)显示出相反的倾向。我们还检测到,基于氨基酸序列比对,这两个下游基因比三个上游基因保守得多。我们发现TLR途径基因的密码子使用偏倚之​​间没有显着差异。这项研究表明,CgToll-1是一种组成型和诱导型蛋白,因此可以在针对细菌感染的免疫反应中发挥重要作用。此外,对TLR途径的比较分析表明,在无脊椎动物进化过程中可能存在基因的丢失和分化。

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