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Cloning, characterization, and expression analysis of extracellular copper/zinc superoxide dismutase gene from bay scallop Argopecten irradians

机译:海湾扇贝Argopecten irradians细胞外铜/锌超氧化物歧化酶基因的克隆,鉴定和表达分析

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Extracellular superoxide dismutase (ECSOD) is a major extracellular antioxidant enzyme that protects organs from damage by reactive oxygen species (ROS). We cloned a novel ECSOD from the bay scallop Argopecten irradians (AiECSOD) by 3' and 5' RACE. The full-length cDNA of AiECSOD was 893bp with a 657bp open reading frame encoding 218 amino acids. The deduced amino acid sequence contained a putative signal peptide of 20 amino acids, and sequence comparison showed that AiECSOD had low degree of homology to ECSODs of other organisms. The genomic length of the AiECSOD gene was about 5276bp containing five exons and six introns. The promoter region contained many putative transcription factor binding sites such as c-Myb, Oct-1, Sp1, Kruppel-like, c-ETS, NF Kappa B, GATA-1, AP-1, and Ubx binding sites. Furthermore, tissue-specific expressions of AiECSOD and temporal expressions of AiECSOD in haemocytes of bay scallops challenged with bacteria Vibrio anguillarum were quantified using qRT-PCR. High levels of expression were detected in haemocytes, but not in gonad and mantle. The expression of AiECSOD reached the highest level at 12h post-injection with V. anguillarum and then returned to normal between 24h and 48h post-injection. These results indicated that AiECSOD was an inducible protein and that it may play an important role in the immune responses against V. anguillarum.
机译:细胞外超氧化物歧化酶(ECSOD)是一种主要的细胞外抗氧化酶,可保护器官免受活性氧(ROS)的损害。我们通过3'和5'RACE从海湾扇贝Argopecten irradians(AiECSOD)克隆了一种新型ECSOD。 AiECSOD的全长cDNA为893bp,带有657bp的开放阅读框,编码218个氨基酸。推导的氨基酸序列包含一个假定的20个氨基酸的信号肽,序列比较表明AiECSOD与其他生物的ECSOD同源性较低。 AiECSOD基因的基因组长度约为5276bp,包含5个外显子和6个内含子。启动子区域包含许多假定的转录因子结合位点,例如c-Myb,Oct-1,Sp1,Kruppel-like,c-ETS,NF Kappa B,GATA-1,AP-1和Ubx结合位点。此外,使用qRT-PCR定量了在被细菌弧菌攻击的海湾扇贝的血细胞中AiECSOD的组织特异性表达和AiECSOD的时间表达。在血细胞中检测到高水平的表达,但在性腺和地幔中未检测到。 AiECSOD的表达在注射鳗gu后12h达到最高水平,然后在注射后24h至48h之间恢复正常。这些结果表明,AiECSOD是一种可诱导的蛋白质,它可能在针对鳗弧菌的免疫应答中起重要作用。

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