首页> 外文期刊>FEMS Microbiology Letters >An MTA phosphorylase gene discovered in the metagenomic library derived from Antarctic top soil during screening for lipolytic active clones confers strong pink fluorescence in the presence of rhodamine B
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An MTA phosphorylase gene discovered in the metagenomic library derived from Antarctic top soil during screening for lipolytic active clones confers strong pink fluorescence in the presence of rhodamine B

机译:在罗丹明B存在下,在筛选脂解活性克隆的过程中,从南极表层土壤衍生的宏基因组文库中发现的MTA磷酸化酶基因赋予强烈的粉红色荧光

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摘要

In this work, we present the construction of a metagenomic library in Escherichia coli using the pUC19 vector and environmental DNA directly isolated from Antarctic topsoil and screened for lipolytic enzymes. Unexpectedly, the screening on agar supplemented with olive oil and rhodamine B revealed one unusual pink fluorescent clone (PINKuv) out of 85 000 clones. This clone harbored a plasmid, pPINKuv, which has an insert of 8317 bp that has been completely sequenced. Further analysis of the insert showed eight ORFs. Three ORFs among these exhibited similarities to Psychrobacter arcticus genes. A nucleotide sequence designated as ORF4 encoded a protein with 93% identity to the methylthioadenosine phosphorylase of P. arcticus. This protein was responsible for the observed pink fluorescence of the PINKuv clone in the presence of rhodamine B. We found that colonies of recombinant E. coli TOP10F'/pUC19-ORF4 strain showed pink fluorescence under UV illumination on the Luria-Bertani agar supplemented with rhodamine B after culturing at 25, 30 and 37 degrees C. The same effect was achieved using other E. coli strains such as DH5 alpha, LMG194, JM101 and BL21(DE3) pLysS. The results presented here will provide the basis for further studies on the use of the discovered gene as a new reporter gene for molecular biology applications.
机译:在这项工作中,我们介绍了使用pUC19载体和直接从南极表层土壤中分离并筛选出脂解酶的环境DNA在大肠杆菌中构建宏基因组文库的方法。出乎意料的是,在添加了橄榄油和若丹明B的琼脂上进行的筛选揭示了85 000个克隆中的一个不寻常的粉红色荧光克隆(PINKuv)。该克隆包含一个质粒pPINKuv,该质粒具有一个8317 bp的插入片段,该插入片段已被完全测序。对该插入物的进一步分析显示了八个ORF。其中三个ORF表现出与北极杆菌(Psychrobacter arcticus)基因相似。命名为ORF4的核苷酸序列编码的蛋白质与北极假单胞菌的甲硫基腺苷磷酸化酶具有93%的同一性。该蛋白质负责在若丹明B存在下观察到的PINKuv克隆的粉红色荧光。我们发现,重组大肠杆菌TOP10F'/ pUC19-ORF4菌株的菌落在补充有Luria-Bertani琼脂的UV照明下在UV照射下显示出粉红色荧光。罗丹明B在25、30和37摄氏度下培养后。使用其他大肠杆菌菌株(如DH5α,LMG194,JM101和BL21(DE3)pLysS)可获得相同的效果。此处给出的结果将为进一步研究将发现的基因用作分子生物学应用的新报告基因提供基础。

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