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首页> 外文期刊>Gene: An International Journal Focusing on Gene Cloning and Gene Structure and Function >Cloning and expression pattern of peroxisomal beta-oxidation genes palmitoyl-CoA oxidase, multifunctional protein and 3-ketoacyl-CoA thiolase in mussel Mytilus galloprovincialis and thicklip grey mullet Chelon labrosus.
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Cloning and expression pattern of peroxisomal beta-oxidation genes palmitoyl-CoA oxidase, multifunctional protein and 3-ketoacyl-CoA thiolase in mussel Mytilus galloprovincialis and thicklip grey mullet Chelon labrosus.

机译:过氧化物酶体β-氧化基因棕榈酰-CoA氧化酶,多功能蛋白和3-酮酰基-CoA硫解酶的克隆和表达模式在贻贝贻贝和厚唇gray鱼Chelon labrosus中。

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Due to the ability to respond after exposure to organic toxic compounds, peroxisome proliferation is used as biomarker of exposure to organic pollutants in mussels and in fish. Mussels are worldwide studied as sentinels of pollution in marine environments while mullets such as the thicklip grey mullet Chelon labrosus have been proposed as appropriate sentinel species since they inhabit highly polluted environments. In order to study genes of the inducible peroxisomal beta-oxidation pathway in mussels Mytilus galloprovincialis and in C. labrosus, genes coding for the three enzymes in the inducible peroxisomal beta-oxidation pathway, palmitoyl-CoA oxidase (AOX1), multifunctional protein (MFP1 in mullet and MFP2 in mussels), and 3-ketoacyl-CoA thiolase (THIO), were cloned. Additionally, a fragment of the peroxisomal Delta(2), Delta(4) dienoyl-CoA reductase 2 (DECR) necessary for the beta-oxidation of unsaturated fatty acids was cloned in mullets. The whole open reading frame of aox1 sequenced in both mussels and mullets revealed high homology with known aox1 sequences, with highly conserved important domains such as the FAD binding motif or the typical peroxisomal targeting signal (PTS1). A thorough in silico analysis of the gene and genome databases allowed to identify in fish and molluscs sequence homologs of all the enzymes necessary for 2 of the 3 different paralog peroxisomal beta-oxidation pathways described in metazoans (AOX1, AOX3, MFP1, MFP2, THIO and sterol carrier protein X). Only the enzyme necessary for the oxidation of branched chain fatty acids, AOX2, described in mammalian, avian and amphibian species, seems to be lacking from the genomes of fish and molluscs. In order to study the expression and regulation capacity of peroxisomal beta-oxidation genes, aox1 and thio expression was determined in different tissues of mature and immature mullets and mussels collected in January and June, both genes being expressed higher in the digestive gland of mussels collected in June compared to January. Finally, in silico studies of the promoter regions in the piscine genomes available in the Ensembl genome repository, allowed the identification of putative peroxisome proliferator response elements that could explain the possible cellular and molecular mechanisms leading to peroxisome proliferation in fish. Further studies are needed to decipher molecular mechanisms of peroxisome proliferation in aquatic organisms under exposure to peroxisome proliferator xenobiotics.
机译:由于暴露于有机有毒化合物后具有响应能力,因此过氧化物酶体增殖被用作暴露于贻贝和鱼类中有机污染物的生物标记。贻贝在海洋环境中被作为污染的前哨进行了世界范围的研究,而鱼(如厚唇gray鱼Chelon labrosus)已被建议作为合适的前哨物种,因为它们生活在污染严重的环境中。为了研究贻贝和唇形贻贝中诱导型过氧化物酶体β-氧化途径的基因,编码诱导型过氧化物酶体β-氧化途径中的三种酶,棕榈酰-CoA氧化酶(AOX1),多功能蛋白(MFP1)的基因克隆了鱼中的MFP和贻贝中的MFP2),并克隆了3-酮酰基-CoA硫解酶(THIO)。此外,在鱼中克隆了过氧化物酶体Delta(2),Delta(4)二烯酰辅酶A还原酶2(DECR)的片段,该片段对于不饱和脂肪酸的β-氧化是必需的。在贻贝和鱼中测序的aox1的整个开放阅读框揭示了与已知aox1序列的高度同源性,具有高度保守的重要域,例如FAD结合基序或典型的过氧化物酶体靶向信号(PTS1)。对基因和基因组数据库进行全面的计算机电子分析,可以在鱼类和软体动物中鉴定出后生动物中描述的3种不同的旁系同源过氧化物酶体β-氧化途径(AOX1,AOX3,MFP1,MFP2,THIO和固醇载体蛋白X)。在鱼类,软体动物的基因组中似乎只缺少氧化支链脂肪酸所必需的酶AOX2(在哺乳动物,鸟类和两栖动物中有描述)。为了研究过氧化物酶体β-氧化基因的表达和调控能力,在1月和6月收集的成熟和未成熟的lets鱼和贻贝的不同组织中测定了aox1和硫代表达,两个基因在采集的贻贝的消化腺中均表达较高6月与1月相比。最后,对Ensembl基因组存储库中可用的鱼类基因组中启动子区域进行了计算机分析,从而鉴定了假定的过氧化物酶体增殖物反应元件,从而可以解释导致鱼中过氧化物酶体增殖的细胞和分子机制。需要进一步的研究来破译在暴露于过氧化物酶体增殖物异源生物下的水生生物中过氧化物酶体增殖的分子机制。

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