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首页> 外文期刊>Evolutionary Ecology Research >Using stage-structured evolutionary game theory to model the experimentally observed evolution of a genetic polymorphism
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Using stage-structured evolutionary game theory to model the experimentally observed evolution of a genetic polymorphism

机译:使用阶段结构的演化博弈论对实验观察到的遗传多态性进化进行建模

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摘要

Aim: Our aim is to show the utility of evolutionary game theory (EGT) methods in describing and predicting the outcome of experiments for which genetic data are available in the absence of phenotypic data. As an example we use experimental data from genetically perturbed cultures of the flour beetle Tribolium castaneum. Using natural selection, the theory provides a theoretical basis for the observed population dynamics and evolution of a polymorphism of wild-type and corn oil sensitive alleles. Method of analysis: We derive an EGT version of a well-validated model for the population dynamics of Tribolium (the LPA model) using a version of EGT developed for stage-structured populations given by Vincent and Brown (2005). We use the wild-type allele frequency as the strategy in this model. We estimate model parameters and conduct simulations using the parameterized model. Experimental data: We use population and genetic data from an experiment conducted by Desharnais (1979). Cultures of T. castaneum homozygous for corn oil sensitivity are perturbed by adding homozygous wild-type individuals. The data include population densities of larvae, pupae, and adults as well as allele frequencies obtained from genetically perturbed cultures. Conclusions: The parameterized EGT version of the LPA model fits reasonably accurately the population and genetic data in both the control and genetically perturbed treatments. For both treatments, the model predicts an oscillatory 2-cycle asymptotic attractor. The predicted oscillations match well with the oscillations observed in the population data, even capturing observed increases in amplitude and population densities in the genetically perturbed treatment. Interestingly, the model also predicts a periodic oscillation in allele frequency, although the amplitude is too small to be detected in the data. We conclude that the EGT-predicted evolution of a polymorphism by natural selection is obtained in agreement with the experimental data. Our results illustrate two points concerning EGT: first, the theory can be successful in application to real data and, second, it can be applied in a context that allows a connection to classical population genetics theory.
机译:目的:我们的目的是展示进化博弈论(EGT)方法在描述和预测实验结果中的效用,在没有表型数据的情况下可获得遗传数据。举例来说,我们使用来自面粉甲虫Tribolium castaneum的遗传扰动培养物的实验数据。使用自然选择,该理论为观察到的种群动态以及野生型和玉米油敏感等位基因多态性的进化提供了理论基础。分析方法:我们使用文森特和布朗(2005)为阶段结构化种群开发的EGT版本,得出了Tribolium种群动态的有效模型的EGT版本(LPA模型)。我们在模型中使用野生型等位基因频率作为策略。我们估计模型参数并使用参数化模型进行仿真。实验数据:我们使用Desharnais(1979)进行的实验得出的种群和遗传数据。加入纯合子野生型个体会扰动纯合子玉米锥虫对玉米油的敏感性。数据包括幼虫,p和成虫的种群密度,以及从遗传扰动培养物中获得的等位基因频率。结论:LPA模型的参数化EGT版本在控制和遗传扰动治疗中均能合理地准确拟合种群和遗传数据。对于这两种处理,该模型均预测出一个振荡的2周期渐近吸引子。预测的振荡与群体数据中观察到的振荡非常匹配,甚至捕获了在遗传扰动的处理中观察到的幅度和群体密度的增加。有趣的是,该模型还预测了等位基因频率的周期性振荡,尽管幅度太小而无法在数据中检测到。我们得出的结论是,通过自然选择,EGT预测了多态性的进化与实验数据一致。我们的结果说明了与EGT有关的两点:首先,该理论可以成功地应用于实际数据,其次,可以在允许与经典种群遗传学理论联系的背景下应用。

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