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首页> 外文期刊>Insect Molecular Biology >Constructing the major biosynthesis pathways for amino acids in the brown planthopper, Nilaparvata lugens Stal (Hemiptera: Delphacidae), based on the transcriptome data
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Constructing the major biosynthesis pathways for amino acids in the brown planthopper, Nilaparvata lugens Stal (Hemiptera: Delphacidae), based on the transcriptome data

机译:基于转录组数据,构建褐飞虱Nilaparvata lugens Stal(Hemiptera:Delphacidae)中氨基酸的主要生物合成途径

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摘要

Nilaparvata lugens is a serious phloem-feeding pest of rice throughout Asia. Rice phloem sap can meet its nutrition requirement for sugars but not for some essential amino acids such as isoleucine, leucine, methionine, phenylalanine, tryptophan, lysine, arginine and histidine. N. lugens harbours yeast-like symbionts in mycetocytes formed by abdominal fat body cells. Removal of the symbionts results in negative physiological effects, suggesting that the symbionts play a pivotal role in the nitrogen metabolism. In the present paper, 521 mRNA expressed sequence tags (ESTs) encoding 126 enzymes that were involved in amino acid biosynthesis were identified based on a transcriptome data, reverse transcription (RT)-PCR and rapid amplification of cDNA ends. Similarity analysis, codon usage bias, along with tissue-biased expression and phylogenetic analysis of a subset of ESTs, suggest that 437 ESTs out of the 521 originate from symbionts, and the remaining 84 mRNA fragments come from N. lugens. Accordingly, the biosynthesis pathways for 20 amino acids were manually constructed. It is postulated that both N. lugens and its symbiont can independently assimilate ammonia and biosynthesize seven non-essential amino acids: glutamate; glutamine; aspartate; asparagine; alanine; serine; and glycine. N. lugens and symbiont enzymes may work collaboratively to catalyse the biosynthesis of proline, methionine, valine, leucine, isoleucine, phenylalanine and tyrosine. We infer from this that symbionts function in the biosynthesis of lysine, arginine, tryptophan, threonine, histidine and cysteine. Our data support the previously proposed hypothesis, i.e. the yeast-like symbionts compensate for, at least partially, the amino acid needs of N. lugens.
机译:Nilaparvata lugens是整个亚洲严重的韧皮部食稻害虫。水稻韧皮部汁液可以满足其对糖的营养需求,但不能满足某些必需氨基酸(如异亮氨酸,亮氨酸,蛋氨酸,苯丙氨酸,色氨酸,赖氨酸,精氨酸和组氨酸)的营养需求。发光猪笼草在由腹部脂肪体细胞形成的肌细胞中具有酵母样共生体。共生体的去除导致负面的生理效应,这表明共生体在氮代谢中起关键作用。在本文中,基于转录组数据,逆转录(RT)-PCR和cDNA末端的快速扩增,鉴定了521种编码126种参与氨基酸生物合成酶的mRNA表达序列标签(EST)。相似性分析,密码子使用偏倚以及EST子集的组织偏向表达和系统发育分析表明,在521个EST中,有437个EST来自共生体,其余84个mRNA片段来自猪笼草。因此,手工构建了20个氨基酸的生物合成途径。推测黄褐猪笼草及其共生体均可以独立吸收氨并生物合成7个非必需氨基酸:谷氨酸;谷氨酸;谷氨酰胺;氨基酸。谷氨酰胺天冬氨酸天冬酰胺丙氨酸丝氨酸和甘氨酸。发光猪笼草和共生酶可以协同工作,催化脯氨酸,蛋氨酸,缬氨酸,亮氨酸,异亮氨酸,苯丙氨酸和酪氨酸的生物合成。我们由此推断,共生体在赖氨酸,精氨酸,色氨酸,苏氨酸,组氨酸和半胱氨酸的生物合成中起作用。我们的数据支持先前提出的假设,即,酵母样共生体至少部分地补偿了发光猪笼草的氨基酸需求。

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