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Angiogenesis: an improved in vitro biological system and automated image-based workflow to aid identification and characterization of angiogenesis and angiogenic modulators.

机译:血管生成:一种改进的体外生物学系统和基于图像的自动化工作流程,有助于识别和表征血管生成和血管生成调节剂。

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摘要

Angiogenesis is a general term describing formation of new tube-like microvessel sprouts that are the size of capillary blood vessels. Angiogenesis is fundamental in key stages of embryonic development, organ formation, and wound repair and is also involved in the development and progression of a variety of pathological conditions, including cancer (tumor growth and metastasis), cardiovascular disease, diabetic retinopathy, age-related macular degeneration, atherosclerosis, and rheumatoid arthritis. Because of its diverse roles in key physiological and pathological processes, angiogenesis is an important area of medical research, with a considerable number of angiogenic and anti-angiogenic drugs currently undergoing clinical trials. Cost-effective and efficient screening for potential lead compounds is therefore of prime importance. However, screening methodologies vary in their physiological relevance depending on how faithfully critical aspects of angiogenesis are represented. Cell-based in vitro angiogenesis assays are important tools for screening, which in many cases rely on imaging microscopy to ascertain drug effects. Unfortunately, such screens can be hampered by poorly defined biology, slow image acquisition by manual or semiautomated hardware, and slow data analysis by non-dedicated software. This article describes use of a 96-well microplate in vitro angiogenesis screening system as part of an integrated workflow, comprising (1) setting up the biology in a three-dimensional physiologically relevant system, (2) acquiring a series of image slices ("stacks") using an automated z-stage instrument, (3) collapsing the image stack series into sets of two-dimensional images, (4) segmenting objects of interest, and (5) analyzing the segmentation patterns in order to obtain statistically relevant data.
机译:血管生成是描述毛细血管大小的新的管状微血管新芽形成的总称。血管生成是胚胎发育,器官形成和伤口修复关键阶段的基础,并且还参与多种病理状况的发展和进程,包括癌症(肿瘤生长和转移),心血管疾病,糖尿病性视网膜病变,与年龄相关的疾病黄斑变性,动脉粥样硬化和类风湿关节炎。由于其在关键生理学和病理学过程中的不同作用,血管生成是医学研究的重要领域,目前有大量血管生成和抗血管生成药物正在临床试验中。因此,对潜在的铅化合物进行具有成本效益的高效筛选至关重要。但是,筛选方法在其生理相关性方面有所不同,这取决于如何忠实地代表血管生成的关键方面。基于细胞的体外血管生成测定是重要的筛选工具,在许多情况下,它们依赖于成像显微镜来确定药物作用。不幸的是,此类屏幕可能会受到生物学定义不清,手动或半自动硬件获取图像的速度缓慢以及非专用软件进行的数据分析速度缓慢的困扰。本文介绍了将96孔微孔板体外血管生成筛选系统作为集成工作流程的一部分的用途,该系统包括(1)在三维生理相关系统中设置生物学,(2)获取一系列图像切片(“堆栈”),使用自动z级平台仪器,(3)将图像堆栈系列折叠成二维图像集,(4)分割感兴趣的对象,以及(5)分析分割模式以获得统计上相关的数据。

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