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A comparison of mu LC/electrospray ionization-MS and GC/MS for the measurement of stable isotope enrichment from a [H-2(2)]-glucose metabolic probe in T-cell genomic DNA

机译:mu LC /电喷雾电离-MS和GC / MS用于比较T细胞基因组DNA中[H-2(2)]-葡萄糖代谢探针的稳定同位素富集的比较

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Measurement of the proliferation of lymphocytes and other high-turnover cell populations in vivo can be accomplished through the incorporation of an isotopically labeled DNA precursor into actively dividing cells and the subsequent determination of the isotope enrichment in the isolated genomic DNA from selected cell populations. Two published gas chromatography/mass spectrometry (GC/MS) methods were successfully modified by our laboratory whereby a postinjection methylation reaction, rather than silylation or acetylation, was used to form a volatile derivative of deoxyadenosine (dA). We also developed a second robust microcapillary liquid chromatography-electrospray ionization (muLC-ESI)/MS method that is faster and more sensitive than the GUMS method and does not require sample derivatization. Following administration of [6,6-H-2(2)]-glucose to human immunodeficiency virus-infected patients , peripheral blood was drawn; cells were obtained by lymphapheresis and fractionated. DNA was isolated from the desired cell subtypes and enzymatically hydrolyzed to the free deoxyribonucleosides. The digest was analyzed using both capillary GC/ MS and muLC/ESI-MS to measure the levels of the dA and [H-2(2)]-dA or their reaction products. Sample enrichments were calculated by comparison to standard curves prepared from dA and [H-2(2)]-dA. The muLC/ESl-MS, method required fewer cells, less sample preparation, shorter analysis times, and a single calibration curve. Overall, the muLC/EST-MS method is superior to the GC/MS method m terms of precision and accuracy, while providing a 4-fold increase in sensitivity (from 20 pmol at 0.2% [H-2(2)]-dA enrichment to 5 pmol at 0.1% [H-2(2)]-dA enrichment). [References: 15]
机译:体内淋巴细胞和其他高周转细胞群增殖的测量可以通过将同位素标记的DNA前体掺入主动分裂的细胞中,然后确定从选定细胞群中分离的基因组DNA中的同位素富集来完成。我们实验室成功地改进了两种公开的气相色谱/质谱(GC / MS)方法,其中使用注射后甲基化反应而不是甲硅烷基化或乙酰化来形成脱氧腺苷(dA)的挥发性衍生物。我们还开发了第二种耐用的微毛细管液相色谱-电喷雾电离(muLC-ESI)/ MS方法,它比GUMS方法更快,更灵敏,并且不需要样品衍生化。向感染了人类免疫缺陷病毒的患者服用[6,6-H-2(2)]-葡萄糖后,抽取外周血;将其抽出。通过淋巴分离获得细胞并分级分离。从所需的细胞亚型中分离出DNA,并酶解为游离的脱氧核糖核苷。使用毛细管GC / MS和muLC / ESI-MS对消化物进行分析,以测量dA和[H-2(2)]-dA或其反应产物的水平。通过与从dA和[H-2(2)]-dA制备的标准曲线比较来计算样品富集度。 muLC / ES1-MS方法需要更少的细胞,更少的样品制备,更短的分析时间和一条校准曲线。总体而言,在精度和准确性方面,muLC / EST-MS方法优于GC / MS方法,同时灵敏度提高了4倍(从0.2%[H-2(2)]-dA时的20 pmol增加)在0.1%[H-2(2)]-dA富集下浓缩至5 pmol)。 [参考:15]

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