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Rapid determination of spore germinability of Clostridium perfringens based on microscopic hyperspectral imaging technology and chemometrics

机译:基于微观高光谱成像技术和化学计量学的梭菌梭菌孢子萌发性的快速测定

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The Gram-positive, anaerobic, spore-forming bacterium, Clostridium perfringens (C. perfringens) causes a variety of diseases in humans and other animals. Spore germination is thought to be the first stage of infection by C. perfringens. AGFK, a mixture of L-asparagine, D-glucose, D-fructose, and potassium ions, is an effective nutrient germinant. The objective of this study was to investigate the effects of different AGFK concentrations (0, 50, 100, 200 mM/mL) on C. perfringens spore germination. This paper proposes a novel rapid method for the measurement of spore germinability based on microscopic hyperspectral imaging technology (HSIT). The spore germination rate (S-rate), the OD600% and Ca2+-DPA% of C. perfringens were determined by chemical methods under different concentrations of AGFK. The results showed that spores have a maximum germination rate of 94.59% after 80 min with 100 mM/mL AGFK. Microscopic HSIT revealed that the spectral and spatial characteristics of spores varied during the spore germination process. Multivariate analyses (GA-siPLS and GA-PLS) and the gray symbiotic matrix (GLCM) were used to extract highly correlated spectral and spatial descriptors from the time-series data from microscopic HSIT, respectively. Single spectral, spatial signals and data fusion of spectral and spatial information were then used to predict the S-rate, the OD600% and Ca2+-DPA % by GA-PLS, respectively. The result show that the S-rate calibration was built by GA-PLS using data fusion variables and yielded acceptable results (R-c = 0.96, RMSEC = 0.64, R-cv = 0.93, RMSEP = 0.87, R-p = 0.94). The OD600% optimal model was built by GA-PLS using image variables and yielded acceptable results (R-c = 0.93, RMSEC = 19.36, R-cv = 0.91, RMSEP = 24.36, R-p = 0.89). For Ca2+-DPA %, the model based on the fusion of spectral and imaging data was optimal. The Ca(2+)DPA % calibration yielded acceptable results (R-c = 0.95, RMSEC = 49.83, R-cv = 0.93, RMSEP = 58.98, R-p = 0.92). This work demonstrates the potential of microscopic HSIT for the non-destructive detection of spore germinability. The data fusion models also significantly improved the prediction of spore germinability. In conclusion, microscopic HSIT exhibits considerable promise for nondestructive diagnostics of spore germination.
机译:革兰氏阳性,厌氧,孢子形成细菌,梭菌(C. perfringens)引起人类和其他动物的各种疾病。孢子萌发被认为是C. profringens感染的第一阶段。 AgFK,L-天冬酰胺,D-葡萄糖,D-果糖和钾离子的混合物是一种有效的营养生成。本研究的目的是研究不同AgFK浓度(0,50,100,200mm / ml)对C.的影响。本文提出了一种基于微观高光谱成像技术(HSIT)测量孢子发芽性的新型快速方法。孢子萌发率(S率),OD600%和Ca2 + -DPA%C.产强胶剂由不同浓度的AgFK下的化学方法测定。结果表明,孢子在80分钟后具有94.59%的最大萌发率为100mm / ml AgFK。微观HSIT显示,孢子萌发过程中孢子的光谱和空间特征在孢子萌发过程中变化。多变量分析(GA-SIPLS和GA-PL)和灰色共生基质(GLCM)分别从微观HSIT的时间序列数据中提取高度相关的光谱和空间描述符。然后使用频谱和空间信息的单光谱,空间信号和数据融合,分别通过GA-PL预测S速率,OD600%和CA2 + -DPA%。结果表明,使用数据融合变量的GA-PLS构建了S速率校准,得到了可接受的结果(R-C = 0.96,RMSEC = 0.64,R-CV = 0.93,RMSEP = 0.87,R-P = 0.94)。 OD600%最佳模型由GA-PLS使用图像变量构建,得到可接受的结果(R-C = 0.93,RMSEC = 19.36,R-CV = 0.91,RMSEP = 24.36,R-P = 0.89)。对于CA2 + -DPA%,基于谱和成像数据融合的模型是最佳的。 Ca(2+)DPA%校准产生可接受的结果(R-C = 0.95,RMSEC = 49.83,R-CV = 0.93,RMSEP = 58.98,R-P = 0.92)。这项工作证明了微观HSIT用于孢子萌发性的非破坏性检测的潜力。数据融合模型也显着改善了孢子发芽性的预测。总之,微观HSIT对孢子萌发的非破坏性诊断表现出相当大的承诺。

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