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首页> 外文期刊>Journal of Theoretical Biology >On the relationship between cell cycle analysis with ergodic principles and age-structured cell population models
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On the relationship between cell cycle analysis with ergodic principles and age-structured cell population models

机译:用遍历原理和年龄结构细胞群模型的细胞周期分析关系

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摘要

Cyclic processes, in particular the cell cycle, are of great importance in cell biology. Continued improvement in cell population analysis methods like fluorescence microscopy, flow cytometry, CyTOF or single-cell omits made mathematical methods based on ergodic principles a powerful tool in studying these processes. In this paper, we establish the relationship between cell cycle analysis with ergodic principles and age structured population models. To this end, we describe the progression of a single cell through the cell cycle by a stochastic differential equation on a one dimensional manifold in the high dimensional dataspace of cell cycle markers. Given the assumption that the cell population is in a steady state, we derive transformation rules which transform the number density on the manifold to the steady state number density of age structured population models. Our theory facilitates the study of cell cycle dependent processes including local molecular events, cell death and cell division from high dimensional "snapshot" data. Ergodic analysis can in general be applied to every process that exhibits a steady state distribution. By combining ergodic analysis with age structured population models we furthermore provide the theoretic basis for extensions of ergodic principles to distribution that deviate from their steady state.
机译:循环过程,特别是细胞周期,在细胞生物学中具有重要意义。荧光显微镜,流式细胞术,细胞术或单细胞等细胞群分析方法的持续改善使得基于ergodic原理的数学方法是研究这些过程的强大工具。在本文中,我们建立了与遍历原则和年龄结构人口模型的细胞周期分析之间的关系。为此,我们通过在单元循环标记的高维数据面积中的一维歧管上的一维歧管上的随机微分方程描述了通过细胞周期来描述单个细胞的进展。鉴于细胞群处于稳定状态的假设,我们推出了转换规则,将歧管的数量密度转化为年龄结构化人口模型的稳态数量密度。我们的理论有助于研究细胞周期依赖过程,包括来自高维“快照”数据的局部分子事件,细胞死亡和细胞分裂。一般来说,ergodic分析适用于表现出稳态分布的每个过程。通过使用年龄结构化人口模型结合ergodic分析,我们还为偏离态度的分布的分布提供了理论基础。

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