首页> 外文期刊>American journal of botany >Genetic diversity, structure, and demographic change in tanoak, Lithocarpus densiflorus (Fagaceae), the most susceptible species to sudden oak death in California.
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Genetic diversity, structure, and demographic change in tanoak, Lithocarpus densiflorus (Fagaceae), the most susceptible species to sudden oak death in California.

机译:塔纳克(Lithocarpus densiflorus)的遗传多样性,结构和人口统计学变化(茄科),是加利福尼亚州最容易遭受橡木突然死亡的物种。

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摘要

Knowledge of population genetic structure of tanoak (Lithocarpus densiflorus) is of interest to pathologists seeking natural variation in resistance to sudden oak death disease, to resource managers who need indications of conservation priorities in this species now threatened by the introduced pathogen (Phytophthora ramorum), and to biologists with interests in demographic processes that have shaped plant populations. We investigated population genetic structure using nuclear and chloroplast DNA (cpDNA) and inferred the effects of past population demographic processes and contemporary gene flow. Our cpDNA results revealed a strong pattern of differentiation of four regional groups (coastal California, southern Oregon, Klamath mountains, and Sierra Nevada). The chloroplast haplotype phylogeny suggests relatively deep divergence of Sierra Nevada and Klamath populations from those of coastal California and southern Oregon. A widespread coastal California haplotype may have resulted from multiple refugial sites during the Last Glacial Maximum or from rapid recolonization from few refugia. Analysis of nuclear microsatellites suggests two major groups: (1) central coastal California and (2) Sierra Nevada/Klamath/southern Oregon and an area of admixture in north coastal California. The low level of nuclear differentiation is likely to be due to pollen gene flow among populations during postglacial range expansion.
机译:寻找tanoak(Lithocarpus densiflorus)的种群遗传结构的知识,对于寻求对橡树猝死的抵抗力具有自然变化的病理学家,对于需要指示该物种目前受到外来病原体(Phytophthora ramorum)威胁的优先保护地位的资源管理人员来说,具有重要意义,以及对影响人口增长过程的人口统计过程感兴趣的生物学家。我们调查了使用核和叶绿体DNA(cpDNA)的人口遗传结构,并推断了过去人口统计学过程和当代基因流的影响。我们的cpDNA结果揭示了四个区域组(沿海加利福尼亚,俄勒冈南部,克拉马斯山脉和内华达山脉)的强烈分化模式。叶绿体单倍型系统发育表明内华达山脉和克拉马斯的种群与加利福尼亚沿海和俄勒冈州南部的种群相对较深。在最后一次冰河极盛期,多个避难所或由于少数避难所导致的快速重新殖民化,可能导致了加利福尼亚沿海的广泛单体型。核微卫星分析表明有两个主要类别:(1)加利福尼亚中部沿海地区和(2)内华达山脉/克拉马斯/俄勒冈州南部以及加利福尼亚州北部沿海地区的混合区域。较低的核分化水平可能是由于冰期范围扩大后花粉基因在人群中的流动。

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