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首页> 外文期刊>Journal of proteomics >Quantitative proteomics analysis of differentially expressed proteins in ruptured and unruptured cerebral aneurysms by iTRAQ
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Quantitative proteomics analysis of differentially expressed proteins in ruptured and unruptured cerebral aneurysms by iTRAQ

机译:ITRAQ破裂和未破碎脑动脉瘤中差异表达蛋白质的定量蛋白质组学分析

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摘要

The underlying pathophysiological mechanisms involved in cerebral aneurysms rupture remain unclear. This study was performed to investigate the differentially expressed proteins between ruptured and unruptured aneurysms using quantitative proteomics. The aneurysmal walls of six ruptured aneurysms and six unruptured aneurysms were collected during the surgical operation. The isobaric tags for relative and absolute quantification (iTRAQ) were used to identify the differentially expressed proteins and western blotting was performed to validate the expression of the proteins of interest. Bioinformatics analysis of the differentially expressed proteins was also performed using the KEGG database and GO database. Between ruptured and unruptured aneurysms, 169 proteins were found differently expressed, including 74 up-regulated proteins and 95 down-regulated proteins with a fold change = 2 and p value = .05. KEGG pathway analysis revealed that phagosome, focal adhesion and ECM-receptor interaction were the most common pathways involved in aneurysm rupture. In addition, the differential expressions of ITGB3, CRABP1 and S100A9 were validated by western blotting. Through the iTRAQ method, we found that inflammatory responses and cell-matrix interactions may play a significant role in the rupture of cerebral aneurysms. These findings provide a basis for better understanding of pathophysiological mechanisms associated with aneurysm rupture.
机译:脑动脉瘤破裂的潜在病理生理机制仍然尚不清楚。进行该研究以使用定量蛋白质组学研究破裂和未破裂的动脉瘤之间的差异表达的蛋白质。在手术操作期间收集六个破裂的动脉瘤和六个未破坏动脉瘤的动脉瘤壁。用于相对和绝对量化(ITRAQ)的等因素标签用于鉴定差异表达的蛋白质,并进行蛋白质印迹以验证感兴趣的蛋白质的表达。使用KEGG数据库和GO数据库进行差异表达蛋白的生物信息分析。在破裂和未破裂的动脉瘤之间,发现169种蛋白质不同表达,包括74个上调的蛋白质和95个下调蛋白质,折叠变化& = 2和P值& = .05。 Kegg途径分析显示,吞噬蛋白酶组,局灶性粘附和ECM受体相互作用是动脉瘤破裂的最常见的途径。此外,通过蛋白质印迹验证ITGB3,Crabp1和S100A9的差异表达。通过ITRAQ方法,我们发现炎症反应和细胞基质相互作用可能在脑动脉瘤破裂中发挥重要作用。这些发现提供了更好地理解与动脉瘤破裂相关的病理生理机制的基础。

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  • 来源
    《Journal of proteomics》 |2018年第2018期|共8页
  • 作者单位

    Capital Med Univ Beijing Tiantan Hosp Dept Neurosurg Beijing 100050 Peoples R China;

    Capital Med Univ Beijing Tiantan Hosp Dept Neurosurg Beijing 100050 Peoples R China;

    Capital Med Univ Beijing Tiantan Hosp Dept Neurosurg Beijing 100050 Peoples R China;

    Jinan Univ Guangzhou Red Cross Hosp Dept Neurosurg Guangzhou Guangdong Peoples R China;

    Capital Med Univ Beijing Tiantan Hosp Dept Neurosurg Beijing 100050 Peoples R China;

    Capital Med Univ Beijing Tiantan Hosp Dept Neurosurg Beijing 100050 Peoples R China;

    Capital Med Univ Beijing Tiantan Hosp Dept Neurosurg Beijing 100050 Peoples R China;

    Capital Med Univ Beijing Tiantan Hosp Dept Neurosurg Beijing 100050 Peoples R China;

    Capital Med Univ Beijing Tiantan Hosp Dept Neurosurg Beijing 100050 Peoples R China;

    Capital Med Univ Beijing Tiantan Hosp Dept Neurosurg Beijing 100050 Peoples R China;

    Capital Med Univ Beijing Tiantan Hosp Dept Neurosurg Beijing 100050 Peoples R China;

  • 收录信息
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 蛋白质;
  • 关键词

    Intracranial aneurysm; Rupture; iTRAQ; Proteomics analysis;

    机译:颅内动脉瘤;破裂;ITRAQ;蛋白质组学分析;

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