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On the minimum value of the Colless index and the bifurcating trees that achieve it

机译:关于聚合物指数的最小值和实现它的分叉树

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摘要

Measures of tree balance play an important role in the analysis of phylogenetic trees. One of the oldest and most popular indices in this regard is the Colless index for rooted bifurcating trees, introduced by Colless (Syst Zool 31:100-104, 1982). While many of its statistical properties under different probabilistic models for phylogenetic trees have already been established, little is known about its minimum value and the trees that achieve it. In this manuscript, we fill this gap in the literature. To begin with, we derive both recursive and closed expressions for the minimum Colless index of a tree with n leaves. Surprisingly, these expressions show a connection between the minimum Colless index and the so-called Blancmange curve, a fractal curve. We then fully characterize the tree shapes that achieve this minimum value and we introduce both an algorithm to generate them and a recurrence to count them. After focusing on two extremal classes of trees with minimum Colless index (the maximally balanced trees and the greedy from the bottom trees), we conclude by showing that all trees with minimum Colless index also have minimum Sackin index, another popular balance index.
机译:树平衡措施在系统发育树的分析中发挥着重要作用。这方面最古老,最受欢迎的指数之一是由小利士引入的生根分叉树的聚会指数(Syst Zool 31:100-104,1982)。虽然已经建立了许多在不同概率模型下的统计特性已经建立,但是关于其最小值和达到它的树木的众所周知。在这份手稿中,我们填补了文学中的这种差距。首先,我们从n个叶子派生了树的最小分层索引的递归和封闭表达式。令人惊讶的是,这些表达式在最小的聚合物索引和所谓的Blancange曲线,分形曲线之间显示连接。然后,我们完全表征了实现此最小值的树形,并且我们介绍了一种算法来生成它们并重新发生来计算它们。在专注于两个极端的树木中,具有最小的聚合物指数(从底部树木的最大均衡的树木和贪婪),我们通过表明所有具有最小折叠指数的树也有最低的Sackin指数,另一个流行的平衡索引。

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