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首页> 外文期刊>Journal of Leukocyte Biology: An Official Publication of the Reticuloendothelial Society >Leukocyte transcriptional signatures dependent on LPS dosage in human endotoxemia
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Leukocyte transcriptional signatures dependent on LPS dosage in human endotoxemia

机译:白细胞转录签名依赖于人内毒素的LPS剂量

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The host immune response is characterized by a complex interplay of signal-specific cellular transcriptional responses. The magnitude of the immune response is dependent on the strength of the external stimulus. Knowledge on leukocyte transcriptional responses altered in response to different stimulus dosages in man is lacking. Here, we sought to identify leukocyte transcriptional signatures dependent on LPS dose in humans. Healthy human volunteers were administered 1 ng/kg (n = 7), 2 ng/kg (n = 6), or 4 ng/kg (n = 7) LPS intravenously. Blood was collected before (pre-LPS) and 4 h after LPS administration. Total RNA was analyzed by microarrays and generalized linear models. Pathway analysis was performed by using Ingenuity pathway analysis. Leukocyte transcriptomes altered per LPS dosage were predominantly shared, with 47% common signatures relative to pre-LPS. A univariate linear model identified a set of 3736 genes that exhibited a dependency on differing LPS dosages. Neutrophil, monocyte, and lymphocyte counts explained 38.9% of the variance in the LPS dose-dependent gene set. A multivariate linear model including leukocyte composition delineated a set of 295 genes with a dependency on LPS dose. Evaluation of the 295 gene signature in patients with sepsis due to abdominal infections showed significant correlations. Promoter regions of the LPS dose gene set were enriched for YY1, EGR1, ELK1, GABPA, KLF4, and REL transcription factor binding sites. Intravenous injection of 1, 2, or 4 ng/kg LPS was accompanied by both shared and distinct leukocyte transcriptional alterations. These data may assist in assessing the severity of the insult in patients with abdominal sepsis.
机译:宿主免疫应答的特征在于信号特异性细胞转录反应的复杂相互作用。免疫应答的幅度取决于外部刺激的强度。缺乏对人类不同刺激剂量改变的白细胞转录反应的知识。在这里,我们试图鉴定人类LPS剂量的白细胞转录签名。静脉内施用健康的人志愿者1ng / kg(n = 7),2ng / kg(n = 6),或4ng / kg(n = 7)Lps。在LPS管理后之前(LPS)和4小时之前收集血液。通过微阵列和广义的线性模型分析总RNA。通过使用巧妙的途径分析进行途径分析。每LPS剂量改变的白细胞转录om主要共用,相对于LPS具有47%的常见签名。单变量线性模型鉴定了一组3736个基因,其表现出对不同的LPS剂量的依赖性。中性粒细胞,单核细胞和淋巴细胞计数在LPS剂量依赖性基因集中解释了38.9%的差异。包括白细胞组合物的多变量线性模型描绘了一组295个基因,依赖于LPS剂量。由于腹部感染引起的脓毒症患者295基因签名的评估显示出显着的相关性。 LPS剂量基因组的启动子区域富含YY1,EGR1,ELK1,GABPA,KLF4和Rel转录因子结合位点。静脉注射1,2或4ng / kg LPS伴随着共享和不同的白细胞转录改变。这些数据可以有助于评估腹部败血症患者的损害的严重程度。

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