首页> 外文期刊>Journal of Computational Intelligence in Bioinformatics >Analysis on the Molecular Biologic Characteristics and Expression of Lysozyme C Separated from Oplegnathus fasciatus
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Analysis on the Molecular Biologic Characteristics and Expression of Lysozyme C Separated from Oplegnathus fasciatus

机译:Oplegnathus Fasciatus分离溶菌酶C的分子生物学特性及表达分析

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Background and Aim: lysozyme has been known as a significant component of the innate immune system of fish. It is reported that the g-type and c-type lysozymes have been identified in fish. Oplegnathus fasciatus is one of the economically important cultured species,generating higher market value and demands in Korea. Contrary to the heavy consumption of O. fasciatus, however, there has been very limited information on their immune system and immunity genes responding against diseases. Methods: This study clarified the molecular biological characteristics of cDNA of the C-type lysozyme from O. fasicatus and conducted phylogency analysis. Furthermore, tissue-specific expression analysis of genes verified the roles of c-type lysozyme in general circumstances. Results: The full-length RbLysC cDNA was 985 bp long and contained an ORF of 432 bp that encoded 143 aa residues, the 5’-UTR of 120 bp and the 3’-UTR of 444 bp. Signal peptide was not found in the terminal and flanking active aspartate region are conserved in RbLysC, and a polyadenylation signal and poly A-tail are present in the 3'-UTR of RbLysC. RbLysC presented the closest distant relationship with sequences from Yellow perch lysozyme C. The highest RbLysC gene expression was observed in the liver, which was about 50-fold relative to that of the PBLs.
机译:背景和目的:溶菌酶已被称为鱼的先天免疫系统的重要组成部分。据报道,G型和C型溶菌酶已在鱼中鉴定。 Oplegnathus Fasciatus是经济上重要的培养物种之一,在韩国产生更高的市场价值和需求。然而,与O. fasciatus的重量消耗相反,有关其免疫系统和反对疾病的免疫基因的信息非常有限。方法:本研究阐明了来自O. fasicatus的C型溶菌酶cDNA的分子生物学特性并进行了电池状分析。此外,基因的组织特异性表达分析验证了C型溶菌酶在一般情况下的作用。结果:全长RBLYSC cDNA为985 bp长,含有432bp的ORF,其编码143 AA残基,120bp的5'-UTR和444bp的3'-UTR。在末端中未发现信号肽,侧翼活性天冬氨酸区在RBLYSC中保守,并且在RBLYSC的3'-UTR中存在多腺苷酸化信号和聚α。 RBLYSC呈现与来自黄鲈鱼溶菌酶C的序列最近的远端关系。在肝脏中观察到最高的RBLYSC基因表达,其相对于PBL的肝脏约为50倍。

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