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Identification of TRIM22 single nucleotide polymorphisms associated with loss of inhibition of HIV-1 transcription and advanced HIV-1 disease

机译:鉴定与HIV-1转录抑制抑制和晚期HIV-1疾病相关的TRIM22单核苷酸多态性

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Objective(s): Tripartite motif-containing 22 (TRIM22) is an interferon-induced protein that inhibits HIV-1 transcription and replication in vitro. Two single nucleotide missense polymorphisms rs7935564A/G (SNP-1) and rs1063303C/G (SNP-2) characterize the coding sequence of human TRIM22 gene. We tested whether these variants affected the inhibitory effect of TRIM22 on HIV-1 replication and transcription and their potential association with HIV-1 disease. Design: The allelic discrimination was determined in 182 HIV-1-negative and among HIV-1-positive individuals with advanced disease progression (advanced progressors; n=57), normal progressors (n=76), and long-term nonprogressors (LTNPs; n=95). Methods: Renilla luciferase activity was measured after infection of activated peripheral blood mononuclear cells (PBMCs) from an additional group of 61 blood donors with a recombinant HIV-1. HIV-1-long terminal repeat (LTR)-driven luciferase activity was tested in the presence of plasmid expressing TRIM22 variants in 293T cells. The SNP genotyping was determined by TaqMan assay. Results: HIV-1 replication was more efficient in PBMCs from donors with SNP-1G and SNP-2G than from those with SNP-1A and SNP-2C alleles. Consistently, TRIM22-GG enhanced, whereas TRIM22-AC restricted basal HIV-1 LTR-driven transcription. In vivo, SNP-1G homozygotes and A/G heterozygotes were more frequent in advanced progressors than in LTNPs [odds ratio (OR)=2.072, P=0.005] or in normal progressors (OR=1.809, P=0.022); in contrast, SNP-2 was not associated with any state of HIV-1 disease progression. Although SNP-2 distribution was similar among the groups, TRIM22-GG haplotype was found more frequently in advanced progressors than in LTNPs (P=0.02). Conclusion: TRIM22 genetic diversity affects HIV-1 replication in vitro and it is a potentially novel determinant of HIV-1 disease severity.
机译:目标:含三方基序的22(TRIM22)是干扰素诱导的蛋白,可在体外抑制HIV-1的转录和复制。两种单核苷酸错义多态性rs7935564A / G(SNP-1)和rs1063303C / G(SNP-2)表征了人类TRIM22基因的编码序列。我们测试了这些变体是否影响TRIM22对HIV-1复制和转录的抑制作用以及它们与HIV-1疾病的潜在关联。设计:在182名HIV-1阴性和HIV-1阳性个体中确定了等位基因歧视,这些个体患有疾病进展晚期(高级进展者; n = 57),正常进展者(n = 76)和长期非进展者(LTNP) ; n = 95)。方法:用重组HIV-1感染另一组61名献血者的活化的外周血单个核细胞(PBMC)后,测定了海肾荧光素酶活性。在293T细胞中表达TRIM22变体的质粒存在下,测试了HIV-1长末端重复(LTR)驱动的萤光素酶活性。通过TaqMan测定法确定SNP基因型。结果:与具有SNP-1A和SNP-2C等位基因的捐献者相比,具有SNP-1G和SNP-2G的捐献者的PBMC中HIV-1复制更为有效。一致地,TRIM22-GG增强,而TRIM22-AC限制基础HIV-1 LTR驱动的转录。在体内,SNP-1G纯合子和A / G杂合子在晚期进展者中比在LTNPs中更常见[几率(OR)= 2.072,P = 0.005]或在正常进展者中(OR = 1.809,P = 0.022);相反,SNP-2与HIV-1疾病进展的任何状态均无关。尽管各组之间的SNP-2分布相似,但在晚期进展者中发现TRIM22-GG单倍型的频率比在LTNP中更高(P = 0.02)。结论:TRIM22遗传多样性影响HIV-1在体外的复制,这可能是HIV-1疾病严重程度的新决定因素。

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