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Developmental and comparative transcriptomic identification of iridophore contribution to white barring in clownfish

机译:红细胞对白禁区对白斑贡献的发展和比较转录组鉴定

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摘要

Actinopterygian fishes harbor at least eight distinct pigment cell types, leading to a fascinating diversity of colors. Among this diversity, the cellular origin of the white color appears to be linked to several pigment cell types such as iridophores or leucophores. We used the clownfish Amphiprion ocellaris, which has a color pattern consisting of white bars over a darker body, to characterize the pigment cells that underlie the white hue. We observe by electron microscopy that cells in white bars are similar to iridophores. In addition, the transcriptomic signature of clownfish white bars exhibits similarities with that of zebrafish iridophores. We further show by pharmacological treatments that these cells are necessary for the white color. Among the top differentially expressed genes in white skin, we identified several genes (fhl2a, fhl2b, saiyan, gpnmb, and apoD1a) and show that three of them are expressed in iridophores. Finally, we show by CRISPR/Cas9 mutagenesis that these genes are critical for iridophore development in zebrafish. Our analyses provide clues to the genomic underpinning of color diversity and allow identification of new iridophore genes in fish.
机译:Actinopterygian鱼类含有至少八种不同的颜料细胞类型,导致颜色的迷人多样性。在这种多样性中,白色的细胞源似乎与几种颜料细胞类型(如铱或睫毛)连接。我们使用了小丑鱼amphiprion ocellaris,该ocellis具有由较暗的身体上的白色条组成的颜色图案,以表征底部色调的颜料细胞。我们观察电子显微镜,即白色棒中的细胞与IRIDoCOOCORS类似。此外,Clownfish White Bars的转录组签名与斑马鱼铱星的相似之处。我们进一步通过药理学治疗表现出这些细胞对于白色的需要。在白皙皮肤的顶部差异表达基因中,我们鉴定了几种基因(FHL2A,FHL2B,Saiyan,GPNMB和Apod1a),并表明其中三种在虹膜中表达。最后,我们通过CRISPR / CAS9诱变表明,这些基因对于斑马鱼的虹膜发​​育至关重要。我们的分析提供了对色彩分集的基因组基因的线索,并允许鉴定鱼类中的新虹膜基因。

著录项

  • 来源
    《Pigment cell & melanoma research》 |2019年第3期|共12页
  • 作者单位

    Observatoire Océanologique de Banyulssur- Mer UMR CNRS 7232 BIOM Sorbonne Université Banyuls-sur-Mer France;

    IGFL ENS de Lyon UMR 5242 CNRS Université Claude Bernard Lyon I Lyon Cedex 07 France;

    Department of Biology University of Washington Seattle Washington;

    ENS de Lyon CNRS UMR 5239 INSERM U1210 LBMC Université Claude Bernard Lyon France;

    Department of Computational Biology Biophore University of Lausanne Lausanne Switzerland;

    Observatoire Océanologique de Banyulssur- Mer UMR CNRS 7232 BIOM Sorbonne Université Banyuls-sur-Mer France;

    Observatoire Océanologique de Banyulssur- Mer UMR CNRS 7232 BIOM Sorbonne Université Banyuls-sur-Mer France;

    Observatoire Océanologique de Banyulssur- Mer UMR CNRS 7232 BIOM Sorbonne Université Banyuls-sur-Mer France;

    Department of Computational Biology Biophore University of Lausanne Lausanne Switzerland;

    ENS de Lyon CNRS UMR 5239 INSERM U1210 LBMC Université Claude Bernard Lyon France;

    Department of Biology Department of Cell Biology University of Virginia Charlottesville Virginia;

    IGFL ENS de Lyon UMR 5242 CNRS Université Claude Bernard Lyon I Lyon Cedex 07 France;

    Observatoire Océanologique de Banyulssur- Mer UMR CNRS 7232 BIOM Sorbonne Université Banyuls-sur-Mer France;

  • 收录信息
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 分子生物学;
  • 关键词

    Amphiprion; clownfish; coral reef fish; iridophore; leucophore; transcriptomic;

    机译:Amphiprion;小丑鱼;珊瑚礁鱼;Iridophore;leucophore;转录组;

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