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首页> 外文期刊>Oncoimmunology. >Identification of tumor-infiltrating immune cells and prognostic validation of tumor-infiltrating mast cells in adrenocortical carcinoma: results from bioinformatics and real-world data
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Identification of tumor-infiltrating immune cells and prognostic validation of tumor-infiltrating mast cells in adrenocortical carcinoma: results from bioinformatics and real-world data

机译:诱导肿瘤浸润的免疫细胞和肾上腺皮质癌肿瘤浸润肥大细胞的预后验证:生物信息学和现实世界数据的结果

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Objective: The purpose of this study was to explore the composition of tumor-infiltrating immune cells (TIIC) and prognostic significance of tumor-infiltrating mast cells (TIMC) in adrenocortical carcinoma (ACC). Methods: The gene expression profiles of ACC were downloaded from the Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GSE90713, GSE12368). The abundance of TIICs in ACC samples was calculated by CIBERSORT algorithm and immunohistochemistry was used to identify mast cells of 39 tumor samples from Fudan University Shanghai Cancer Center (FUSCC). Differentially expressed genes (DEGs) were analyzed by LIMMA package using R software. Survival analysis was analyzed by Kaplan-Meier method and Cox regression models. Results: The abundance of mast cells (p = .008) was positively correlated with ACC patients outcome in TCGA cohort and was also positively correlated with both overall survival (p < .05) and progression-free survival (p < .05) in FUSCC cohort. Different TIMC infiltrations showed significant changes in signaling pathways including DNA replication, nuclear chromosome segregation, and meiotic cell cycle process of ACC. In addition, elevated expression of eight hub genes (KIF18A, CDCA8, SKA1, CEP55, BUB1, CDK1, SGOL1, SGOL2) related to the abundance of TIMC in ACC was significantly correlated with the poor prognosis of the patients. Conclusion: In conclusion, higher TIMC infiltration was positively correlated with ACC patients outcome in both TCGA and FUSCC cohort. Lower TIMC infiltration and elevated expression of hub genes (KIF18A, CDCA8, SKA1, CEP55, BUB1, CDK1, SGOL1, SGOL2) are markedly correlated with aggressive progression and poor prognosis, which might shed lights on novel targets for treatment strategies. ?2020, ?2020 The Author(s). Published with license by Taylor & Francis Group, LLC.
机译:目的:本研究的目的是探讨肿瘤浸润的免疫细胞(TIIC)的组成以及肾上腺皮质癌(ACC)中肿瘤浸润肥大细胞(TIMC)的预后意义。方法:从癌症基因组地图集(​​TCGA)和基因表达Omnibus(GSE90713,GSE12368)下载ACC的基因表达谱。 ACC样品中的丰度通过Cibersort算法和免疫组织化学来计算,用于鉴定来自上海癌症中心(FUSCC)的39颗肿瘤样本的肥大细胞。利用R软件通过利马封装分析差异表达的基因(DEGS)。通过Kaplan-Meier方法和Cox回归模型分析了存活分析。结果:肥大细胞的丰富(p = .008)与TCGA队列中的ACC患者呈正相关,并与整体存活(P <.05)和无进展存活(P <.05)呈正相关Fuscc Cohort。不同的TIMC渗透显示,包括DNA复制,核染色体隔离和ACC的减数分裂细胞周期过程的信号传导途径的显着变化。此外,与ACC中的丰度相关的八个枢纽基因(KIF18A,CDCA8,SKA1,CEP5,BUP1,CDK1,SGOL1,SGOL2)的表达升高与患者预后的差异显着相关。结论:总之,较高的TIMC渗透与TCGA和FUSCC队列中的ACC患者结果正相关。较低的TIMC浸润和枢纽基因的升高表达(KIF18A,CDCA8,SKA1,CEP55,BUB1,CDK1,SGOL1,SGOL2)与激进进展和预后差异显着相关,这可能在新颖的治疗策略中揭示了新的靶标。 ?2020,?2020作者。泰勒和弗朗西斯集团,LLC发布牌照。

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