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首页> 外文期刊>Methods: A Companion to Methods in Enzymology >Total cellular protein presence of the transcription factor IRF8 does not necessarily correlate with its nuclear presence
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Total cellular protein presence of the transcription factor IRF8 does not necessarily correlate with its nuclear presence

机译:转录因子IRF8的总细胞蛋白质存在不一定与其核存在相关

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The transcription factor interferon regulatory factor-8 (IRF8) plays an essential role in myeloid differentiation and lineage commitment, based largely on molecular and genetic studies. The detection of IRF8 in specific cell populations by flow cytometry (FCM) has the potential to provide new insights into normal and pathologic myelopoiesis, but critical validation of this protein-based approach, particularly in human samples, is lacking. In this study, the assessment of total cellular IRF8 presence was compared to its specific nuclear presence as assessed by imaging flow cytometry (IFC) analysis. Peptide neutralization of the IRF8-specific antibody that has been predominantly used to date in the literature served as a negative control for the immunofluorescent labeling. Expression of total IRF8 was analyzed by total cellular fluorescence analogous to the mean fluorescence intensity readout of conventional FCM. Additionally, specific nuclear fluorescence and the similarity score between the nuclear image (DAPI) and the corresponding IRF8 image for each cell were analyzed as parameters for nuclear localization of IRF8. IFC showed that peptide blocking eliminated binding of the IRF8 antibody in the nucleus. It also reduced cytoplasmic binding of the antibody but not to the extent observed in the nucleus. In agreement with the similarity score data, the total cellular IRF8 as well as nuclear IRF8 intensities decreased with peptide blocking. In healthy donor peripheral blood subpopulations and a positive control cell line (THP-1), the assessment of IRF8 by total cellular presence correlated well with its specific nuclear presence and correlated with the known distribution of IRF8 in these cells. In clinical samples of myeloid-derived suppressors cells derived from patients with renal carcinoma, however, total cellular IRF8 did not necessarily correlate with its nuclear presence. Discordance was primarily associated with peptide blocking having a proportionally greater effect on the IRF8 nuclear localization versus total fluorescence assessment. The data thus indicate that IRF8 can have cytoplasmic presence and that during disease its nuclear-cytoplasmic distribution may be altered, which may provide a basis for potential myeloid defects during certain pathologies. (C) 2016 Published by Elsevier Inc.
机译:转录因子干扰素调节因子-8(IRF8)在很大程度上在粘合剂分化和血丝承诺中起重要作用,基于分子和遗传研究。通过流式细胞术(FCM)检测特定细胞群中的IRF8具有潜在的缺乏对正常和病理髓鞘的新见解,而是缺乏这种基于蛋白质的方法的关键验证,特别是在人类样品中。在本研究中,通过成像流式细胞术(IFC)分析评估,将总细胞IRF8存在的评估与其特定的核存在进行了比较。在文献中主要用于迄今为止的IRF8特异性抗体的肽中和用作免疫荧光标记的阴性对照。通过与常规FCM的平均荧光强度读出的总细胞荧光分析总IRF8的表达。另外,将每个细胞的核图像(DAPI)和相应IRF8图像之间的特定核荧光和相似性得分作为IRF8的核定位参数分析。 IFC显示肽阻断在核中的IRF8抗体的消除结合。它还减少了抗体的细胞质结合,但不应于核中观察到的程度。同意与相似性评分数据,总细胞IRF8以及核IRF8强度随肽阻断而降低。在健康的供体外周血亚血管和阳性对照细胞系(THP-1)中,通过总细胞存在对IRF8的评估良好,其特定的核存在并与这些细胞中的IRF8的已知分布相关。然而,在霉菌衍生的抑制剂细胞源自肾癌患者的临床样本中,然而,总细胞IRF8并不一定与其核存在相关。不良主要与肽阻断有关,对IRF8核定位的影响与总荧光评估相比。因此,数据表明IRF8可以具有细胞质存在,并且在疾病期间可能会改变核 - 细胞质分布,这可能在某些病程中提供潜在的骨髓缺陷的基础。 (c)2016年由elsevier公司发布

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