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Calcinea of the Red Sea: providing a DNA barcode inventory with description of four new species

机译:红海的Calcinea:提供DNA条形码库存,其中包含四种新物种

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摘要

The Red Sea is a biodiversity hotspot with a considerable percentage of endemic species for many marine animals. Little is known about the diversity and distribution of calcareous sponges (Porifera, Class Calcarea) in this marginal sea. Here we analysed calcareous sponges of the subclass Calcinea that were collected between 2009 and 2013 at 20 localities in the Red Sea, ranging from the Gulf of Aqaba in the north to the Farasan Islands in the south, to document the species of this region. For this, we applied an integrative approach: We defined OTUs based on the analyses of a recently suggested standard DNA marker, the LSU C-region. The analysis was complemented with a second marker, the internal transcribed spacer, for selected specimens. Ten OTUs were identified. Specimens of each OTU were morphologically examined with spicule preparations and histological sections. Accordingly, our ten OTUs represent ten species, which cover taxonomically a broad range of the subclass. By combining molecular and morphological data, we describe four new species from the Red Sea: Soleneiscus hamatus sp. nov., Ernstia arabica sp. nov., Clathrina rotundata sp. nov., and Clathrina rowi sp. nov.. One additional small specimen was closely related to "Clathrina" adusta, but due to the small size it could not be properly analysed morphologically. By providing the DNA sequences for the morphologically documented specimens in the Sponge Barcoding Database (www.spongebarcoding.org) we facilitate future DNA-assisted species identification of Red Sea Calcinea, even for small or incomplete samples, which would be insufficient for morphological identification. Application of DNA barcode methods in the subclass will help to further investigate the distribution of Calcinea in the Red Sea and adjacent regions.
机译:红海是一种生物多样性热点,对许多海洋动物具有相当大的流行病物种。关于这种边际海洋钙质海绵(Porifera,Calcarea)的多样性和分布知之甚少。在这里,我们分析了2009年至2013年在红海的20个地方收集的亚组钙化钙的钙质海绵,从北南方的澳大利亚湾到南法拉巴群岛,记录了该地区的物种。为此,我们应用了一种综合方法:我们根据最近建议的标准DNA标记,LSU C区的分析定义了OTU。将分析与第二标记物,内部转录间隔物互补,用于选定的标本。确定了十个Otus。每个OTU的标本用分子制剂和组织学部分进行形态检查。因此,我们的十个Otus代表了十种物种,该物种覆盖了分类上的广泛的子类。通过组合分子和形态学数据,我们描述了来自红海的四种新物种:Sceneiscus hamatus sp。 11月。,Ernstia阿拉伯州SP。 11月。,Clathrina rotundata sp。 11月。和clathrina rowi sp。 11月..一个额外的小样本与“Clathrina”Adusta密切相关,但由于尺寸小,不能正交分析。通过在海绵条条形码数据库(www.spongebarcoding.org)中提供形态上记录的标本的DNA序列,我们促进了未来的DNA辅助物种鉴定红海煅烧酶,即使对于小或不完全的样品,这对于形态学鉴定也不足够。 DNA条形码方法在子类中的应用将有助于进一步研究红海和邻近地区的煅烧肌的分布。

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  • 来源
    《Marine Biodiversity》 |2017年第4期|共26页
  • 作者单位

    Ludwig Maximilians Univ Munchen Dept Earth &

    Environm Sci Palaeontol &

    Geobiol Richard Wagner Str 10 D-80333 Munich Germany;

    Ludwig Maximilians Univ Munchen Dept Earth &

    Environm Sci Palaeontol &

    Geobiol Richard Wagner Str 10 D-80333 Munich Germany;

    Ludwig Maximilians Univ Munchen Dept Earth &

    Environm Sci Palaeontol &

    Geobiol Richard Wagner Str 10 D-80333 Munich Germany;

    King Abdulaziz Univ Fac Marine Sci Dept Marine Biol POB 80207 Jeddah 21589 Saudi Arabia;

    King Abdullah Univ Sci &

    Technol Red Sea Res Ctr Thuwal 239556900 Saudi Arabia;

    Ludwig Maximilians Univ Munchen Dept Earth &

    Environm Sci Palaeontol &

    Geobiol Richard Wagner Str 10 D-80333 Munich Germany;

  • 收录信息
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 海洋学;
  • 关键词

    Porifera; Calcarea; Red Sea; DNA barcoding; Taxonomy;

    机译:Porifera;Calcarea;红海;DNA条形码;分类;

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