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Ultra-Fast On-Site Molecular Detection of Foodborne Pathogens Using a Combination of Convection Polymerase Chain Reaction and Nucleic Acid Lateral Flow Immunoassay

机译:使用对流聚合酶链反应和核酸横向流动免疫测定的组合超快现场分子检测食源性病原体

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Salmonella enterica serovars, Salmonella Enteritidis and Salmonella Typhimurium, and Escherichia coli O157:H7 were used as the target pathogens. We confirmed the specific amplification of the target species with specifically designed modified primer sets for cPCR in singleplex and duplex modes. After cPCR amplification, we compared the detection specificity and sensitivity using agarose gel electrophoresis and NALF assays with one or two test lines. The cPCR amplicons were readily and sensitively detected using the NALF assay, and the sensitivity was comparable with that of agarose gel electrophoresis. To confirm the application of the assay in real-life samples, the assay was used to test artificially contaminated milk. Without sample pre-enrichment, the limit of detection (LOD) was 4.5 × 10~(3) colony-forming units (CFU)/mL for Salmonella species; 4.5 × 10~(4) CFU/mL to differentiate Salmonella Enteritidis and Salmonella Typhimurium; and 2.3 × 10~(3) CFU/mL for E. coli O157:H7, in a duplex assay. With a 6 h pre-enrichment, the LOD was 4.5 CFU/mL for Salmonella Enteritidis and Salmonella Typhimurium, and 2.3 CFU/mL for E. coli O157:H7. The cPCR amplification took only 14 min, and the NALF assay took ca. 5 min. The total analysis time was less than 20 min. Based on these observations, we propose that the developed assay is simple, ultra-fast, and applicable for on-site detection of foodborne pathogens.
机译:Salmonella肠道塞洛维拉斯,沙门氏菌肠炎和沙门氏菌毒蕈,以及大肠杆菌O157:H7用作靶病原体。我们确认了对单侧和双工模式的CPCR专门设计的修饰引物组的特异性扩增。在CPCR扩增后,使用琼脂糖凝胶电泳和NALF测定与一种或两根测试线进行比较了检测特异性和灵敏度。使用NALF测定易于检测CPCR扩增子,灵敏度与琼脂糖凝胶电泳的敏感性相当。为了确认测定在现实样品中的应用,用于测试人为污染的牛奶。没有样品预富集,检测限(LOD)为4.5×10〜(3)个菌落 - 形成单位(CFU)/ ml用于沙门氏菌; 4.5×10〜(4)CFU / ml,以区分沙门氏菌肠道和沙门氏菌伤寒癣;在双工测定中,2.3×10〜(3)CFU / ml用于大肠杆菌O157:H7。用6小时的预富集,LOD为Salmonella Entinitidis和Salmonella Typhimurium的4.5 CFU / ml,以及2.3 CFU / ml的大肠杆菌O157:H7。 CPCR扩增仅服用14分钟,NALF测定占据了CA. 5分钟。总分析时间小于20分钟。基于这些观察,我们提出了开发的测定简单,超快,适用于现场检测食源性病原体。

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