Metabolic potential and        <i xmlns='http://www.wiley.com/namespaces/wiley'>in situin situ        transcriptomic profiles of previously uncharacterized key microbial groups involved in coupled carbon, nitrogen and sulfur cycling in anoxic marine zones

Plominsky Alvaro M.; Trefault Nicole; Podell Sheila; Blanton Jessica M.; De la Iglesia Rodrigo; Allen Eric E.; von Dassow Peter; Ulloa Osvaldo

摘要

Summary >Anoxic marine zones (AMZs) impact biogeochemical cycles at the global scale, particularly the nitrogen cycle. Key microbial players from AMZs have been identified, but the majority remains unrecognized or uncharacterized. Thirty‐one single‐cell amplified genomes (SAGs) from the eastern tropical North and South Pacific AMZs were sequenced to gain insight into the distribution, metabolic potential and contribution to the community transcriptional profile of these uncharacterized bacterial and archaeal groups. Detailed analyses focused on SAG‐bins assigned to three of these groups that presented 79%–100% estimated genome completeness: the putative sulphur‐oxidizing Gamaproteobacteria EOSA II clade, a Marinimicrobia member of the recently recognized PN262000N21 clade found to be abundant in AMZ anoxic cores, and a representative of the Marine Benthic Group A Thaumarchaeota. Community‐based analyses revealed that these three groups are significantly more abundant and transcriptionally more active in the AMZ microbial communities than previously described phylogenetically related microbial groups. Collectively, these groups have the potential to link biogeochemically relevant processes by coupling the carbon, nitrogen and sulfur cycles. Together, these results increase our understanding of key microbial components inhabiting AMZs and other oxygen‐deficient marine environments, enhancing our capacity to predict the impact of the expansion of these ecosystems due to climate change. </abstract> </span> <span class="z_kbtn z_kbtnclass hoverxs" style="display: none;">展开▼</span> </div> <div class="translation abstracttxt"> <span class="zhankaihshouqi fivelineshidden" id="abstract"> <span>机译：</span><abstract xmlns =“http://www.wiley.com/namespaces/wiley”type =“main”xml：lang =“en”> <title type =“main”>摘要</ title> > anoxic海洋区域（AMZ）在全球范围内影响生物地质化学循环，特别是氮循环。来自AMZ的关键微生物玩家已经确定，但大多数仍然是未被识别或无表征的。从东部热带北部和南太平区的三十一体细胞扩增基因组（SAG）被测序，以了解对这些无表征性细菌和古群体群体的社区转录概况的分布，代谢潜力和贡献。详细分析专注于分配给其中三个群体的SAG箱79％-100％估计的基因组完整性：推定的硫氧化Gamaproteobaction Eosa II Clade，最近认识到的PN262000N21思想家的Marinimicrobia成员被发现是丰富的AMZ毒物核心，以及海洋底栖群的代表A Thaumarchaeota。基于社区的分析表明，这三组在AMZ微生物群体中显着更丰富并且在amz微生物群体中具有比以前描述的系统发生相关的微生物基团更高的活性。集体，这些组具有通过偶联碳，氮和硫循环来将生物地球化学相关方法联系起来。这些结果在一起增加了我们对关键微生物组件居住的AMZ和其他缺氧海洋环境的理解，提高了我们预测由于气候变化引起的扩张这些生态系统的影响的能力。</ p> </摘要> </span> <span class="z_kbtn z_kbtnclass hoverxs" style="display: none;">展开▼</span> </div> </div> <div class="record"> <h2 class="all_title" id="enpatent33" >著录项</h2> <ul> <li> <span class="lefttit">来源</span> <div style="width: 86%;vertical-align: text-top;display: inline-block;"> <a href='/journal-foreign-22868/'>《Environmental microbiology》</a> <b style="margin: 0 2px;">|</b><span>2018年第8期</span><b style="margin: 0 2px;">|</b><span>共16页</span> </div> </li> <li> <div class="author"> <span class="lefttit">作者</span> <p id="fAuthorthree" class="threelineshidden zhankaihshouqi"> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Plominsky Alvaro M.&option=202" target="_blank" rel="nofollow">Plominsky Alvaro M.;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Trefault Nicole&option=202" target="_blank" rel="nofollow">Trefault Nicole;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Podell Sheila&option=202" target="_blank" rel="nofollow">Podell Sheila;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Blanton Jessica M.&option=202" target="_blank" rel="nofollow">Blanton Jessica M.;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=De la Iglesia Rodrigo&option=202" target="_blank" rel="nofollow">De la Iglesia Rodrigo;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Allen Eric E.&option=202" target="_blank" rel="nofollow">Allen Eric E.;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=von Dassow Peter&option=202" target="_blank" rel="nofollow">von Dassow Peter;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Ulloa Osvaldo&option=202" target="_blank" rel="nofollow">Ulloa Osvaldo;</a> </p> <span class="z_kbtnclass z_kbtnclassall hoverxs" id="zkzz" style="display: none;">展开▼</span> </div> </li> <li> <div style="display: flex;"> <span class="lefttit">作者单位</span> <div style="position: relative;margin-left: 3px;max-width: 639px;"> <div class="threelineshidden zhankaihshouqi" id="fOrgthree"> <p>Departamento de OceanografíaUniversidad de Concepción P.O. Box 160‐CConcepción 4070386 Chile;</p> <p>GEMA Center for Genomics Ecology &</p> <p>Environment Universidad MayorSantiago 8580745 Chile;</p> <p>Marine Biology Research DivisionScripps Institution of Oceanography University of California San DiegoSan Diego CA 92093‐0202 USA;</p> <p>Marine Biology Research DivisionScripps Institution of Oceanography University of California San DiegoSan Diego CA 92093‐0202 USA;</p> <p>Department of Molecular Genetics and MicrobiologyPontificia Universidad Católica de ChileSantiago 8331150 Chile;</p> <p>Marine Biology Research DivisionScripps Institution of Oceanography University of California San DiegoSan Diego CA 92093‐0202 USA;</p> <p>Instituto Milenio de Oceanografía Universidad de ConcepciónConcepción Chile;</p> <p>Departamento de OceanografíaUniversidad de Concepción P.O. Box 160‐CConcepción 4070386 Chile;</p> </div> <span class="z_kbtnclass z_kbtnclassall hoverxs" id="zhdw" style="display: none;">展开▼</span> </div> </div> </li> <li > <span class="lefttit">收录信息</span> <span style="width: 86%;vertical-align: text-top;display: inline-block;"></span> </li> <li> <span class="lefttit">原文格式</span> <span>PDF</span> </li> <li> <span class="lefttit">正文语种</span> <span>eng</span> </li> <li> <span class="lefttit">中图分类</span> <span><a href="https://www.zhangqiaokeyan.com/clc/183.html" title="微生物学">微生物学;</a></span> </li> <li class="antistop"> <span class="lefttit">关键词</span> <p style="width: 86%;vertical-align: text-top;"> </p> </li> </ul> </div> </div> <div class="literature cardcommon"> <div class="similarity "> <h3 class="all_title" id="enpatent66">相似文献</h3> <div class="similaritytab clearfix"> <ul> <li class="active" >外文文献</li> </ul> </div> <div class="similarity_details"> <ul > <li> <div> <b>1. </b><a class="enjiyixqcontent" 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Metabolic potential and in situin situ transcriptomic profiles of previously uncharacterized key microbial groups involved in coupled carbon, nitrogen and sulfur cycling in anoxic marine zones

摘要